clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF025C20 | Sequence | 498 | 008012 (4) | ref|XP_009588391.1| | 1e-46 | PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis] | 724 | 007086 (4) | ref|XP_004241405.1| | 3e-99 | PREDICTED: lysine--tRNA ligase [Solanum lycopersicum] |
JMFF027F17 | Sequence | 502 | 008012 (4) | ref|XP_009588391.1| | 3e-47 | PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis] | 812 | 007086 (4) | ref|XP_004241405.1| | 2e-115 | PREDICTED: lysine--tRNA ligase [Solanum lycopersicum] |
JMSF018G17 | Sequence | 438 | 008012 (4) | ref|XP_009588391.1| | 4e-37 | PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis] | 755 | 007086 (4) | emb|CAC12821.1| | 4e-94 | lysyl-tRNA synthetase [Nicotiana tabacum] |
JMSF041D10 | Sequence | 763 | 008012 (4) | ref|XP_006347288.1| | 3e-106 | PREDICTED: lysine--tRNA ligase-like [Solanum tuberosum] | 633 | 007086 (4) | ref|XP_004241405.1| | 3e-101 | PREDICTED: lysine--tRNA ligase [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008012============================================ 763 ============================================Contig007086============================================ 875 9 ------------------------------------------------------->JMSF018G17 <-------------------------------------------------------------------------------------rJMSF018G17 79 ---------------------------------------------------------------->JMFF025C20 <----------------------------------------------------------------------------------rJMFF025C20 79 ---------------------------------------------------------------->JMFF027F17 <-------------------------------------------------------------------------------------------rJMFF027F17 171 --------------------------------------------------------------------------------------------------->JMSF041D10 <----------------------------------------------------------------------rJMSF041D10