clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005M08 | Sequence | 492 | 003179 (4) | gb|ACQ44244.1| | 3e-77 | chlorophyll synthase [Nicotiana tabacum] | 479 | 009612 (4) | ref|XP_009376426.1| | 1e-51 | PREDICTED: chlorophyll synthase, chloroplastic-like isoform X1 [Pyrus x bretsch |
JMFF005N08 | Sequence | 553 | 003179 (4) | ref|XP_009762729.1| | 1e-93 | PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana sylvestris] | 791 | 009612 (4) | ref|XP_009606938.1| | 1e-85 | PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana tomentosiformis] |
JMFF020K13 | Sequence | 558 | 003179 (4) | ref|XP_009762729.1| | 2e-78 | PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana sylvestris] | 692 | 009612 (4) | ref|XP_009606938.1| | 6e-61 | PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana tomentosiformis] |
JMFF025H15 | Sequence | 558 | 003179 (4) | gb|ACQ44244.1| | 2e-93 | chlorophyll synthase [Nicotiana tabacum] | 792 | 009612 (4) | ref|XP_009606938.1| | 1e-85 | PREDICTED: chlorophyll synthase, chloroplastic [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003179============================================ 559 ============================================Contig009612============================================ 793 2 -------------------------------------------------------------------------------------------------->JMFF005N08 <---------------------------------------------------------------------------------------------------rJMFF005N08 11 -------------------------------------------------------------------------------------------------->JMFF020K13 <-------------------------------------------------------------------------------------rJMFF020K13 11 --------------------------------------------------------------------------------------------------->JMFF025H15 <--------------------------------------------------------------------------------------------------rJMFF025H15 172 --------------------------------------------------------------------------------------->JMFF005M08 <-----------------------------------------------------------rJMFF005M08