List of clones in pair P000700.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS012C08Sequence619003539 (8)gb|KDO43322.1|7e-96hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis]
JMFS051D05Sequence621003539 (8)emb|CDP16685.1|1e-106unnamed protein product [Coffea canephora]
JMFS139E10Sequence110003539 (8)ref|XP_008379124.1|1e-11PREDICTED: chloride channel protein CLC-b isoform X2 [Malus domestica]
JMFS159D11Sequence527008434 (7)ref|XP_009596046.1|6e-62PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMSF001C04Sequence354003539 (8)ref|XP_009761471.1|1e-38PREDICTED: chloride channel protein CLC-b-like [Nicotiana sylvestris]786008434 (7)ref|XP_009596046.1|8e-103PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMSF002L02Sequence426003539 (8)gb|KDO43322.1|2e-55hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis]366008434 (7)
JMSF005L05Sequence417003539 (8)ref|XP_008379123.1|7e-47PREDICTED: chloride channel protein CLC-b isoform X1 [Malus domestica]534008434 (7)ref|XP_009596046.1|7e-62PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMSF007F01Sequence428003539 (8)gb|KDO43322.1|2e-55hypothetical protein CISIN_1g0039661mg, partial [Citrus sinensis]812008434 (7)ref|XP_009596046.1|1e-58PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMSF031H16Sequence720008434 (7)ref|XP_009596046.1|6e-40PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]
JMSF031I20Sequence625003539 (8)emb|CDP16685.1|7e-83unnamed protein product [Coffea canephora]751008434 (7)ref|XP_009596046.1|2e-94PREDICTED: chloride channel protein CLC-b-like [Nicotiana tomentosiformis]

Contig 3539 BLAST Hits against nr-aa DB Show

Contig 8434 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003539============================================ 699         ============================================Contig008434============================================1115
  39      ------------------------------------------------------------>JMSF007F01                                                                <------------------------------------------------------------------------rJMSF007F01  
  82       ------------------------------------------------------------>JMSF002L02                                                                                                    <-------------------------------rJMSF002L02  
 334 ----------------------------------------------------------->JMSF005L05                                                                 <-----------------------------------------------rJMSF005L05  
 392          -------------------------------------------------------------------------------------->JMSF031I20          <------------------------------------------------------------------rJMSF031I20  
 518                            ------------------------->JMSF001C04                                                  <---------------------------------------------------------------------rJMSF001C04  
                ---------------------------------------------------------------------------------------->JMFS051D05-  
                          --------------->JMFS139E10-                                                                 
        ---------------------------------------------------------------------------------------->JMFS012C08-          
                                                                                                                                                         <-----------------------------------------------------------rJMSF031H16- 
                                                                                                                                                ---------------------------------------------->JMFS159D11-