List of clones in pair P000668.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017L05Sequence536003252 (6)ref|XP_009608692.1|3e-81PREDICTED: V-type proton ATPase subunit H [Nicotiana tomentosiformis] ref|XP_009767002566 (6)ref|XP_009608692.1|1e-79PREDICTED: V-type proton ATPase subunit H [Nicotiana tomentosiformis] ref|XP_009
JMFF019G14Sequence557003252 (6)ref|XP_009608692.1|2e-83PREDICTED: V-type proton ATPase subunit H [Nicotiana tomentosiformis] ref|XP_009764002566 (6)emb|CDP04145.1|4e-108unnamed protein product [Coffea canephora]
JMFF040N19Sequence504003252 (6)ref|XP_009608692.1|2e-71PREDICTED: V-type proton ATPase subunit H [Nicotiana tomentosiformis] ref|XP_009638002566 (6)ref|XP_006437446.1|9e-82hypothetical protein CICLE_v10032936mg [Citrus clementina] gb|ESR50686.1| hypoth
JMFN043P16Sequence628002566 (6)ref|XP_006437446.1|1e-80hypothetical protein CICLE_v10032936mg [Citrus clementina] gb|ESR50686.1| hypoth
JMSF002M19Sequence325003252 (6)emb|CDP04144.1|4e-37unnamed protein product [Coffea canephora]708002566 (6)emb|CDP04145.1|2e-108unnamed protein product [Coffea canephora]
JMSF012F12Sequence478003252 (6)ref|XP_009608692.1|2e-69PREDICTED: V-type proton ATPase subunit H [Nicotiana tomentosiformis] ref|XP_009752002566 (6)ref|XP_011044458.1|1e-101PREDICTED: V-type proton ATPase subunit H isoform X2 [Populus euphratica]

Contig 3252 BLAST Hits against nr-aa DB Show

Contig 2566 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003252============================================ 557         ============================================Contig002566============================================ 780
  14   ----------------------------------------------------------------------------------------------->JMFF017L05       <-------------------------------------------------------------------------------------------------rJMFF017L05  
  19 --------------------------------------------------------------------------------------------------->JMFF019G14   <-------------------------------------------------------------------------------------------------rJMFF019G14  
  34 ----------------------------------------------------------------------------------------->JMFF040N19                             <-------------------------------------------------------------------------------rJMFF040N19  
  37    ------------------------------------------------------------------------------------->JMSF012F12                <-----------------------------------------------------------------------------------------------rJMSF012F12  
 102     --------------------------------------------------------->JMSF002M19                                         <-----------------------------------------------------------------------------------------rJMSF002M19  
     ----------------------------------------------------------------------------------------->JMFF040N03#            
                                                                                                                                       -------------------------------------------------------------------------------->JMFN043P16-