clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012E21 | Sequence | 521 | 006368 (6) | ref|NP_001275147.1| | 6e-86 | phosphatidate cytidylyltransferase 1 [Solanum tuberosum] sp|O04940.1|CDS1_SOLTU | 755 | 001374 (6) | ref|XP_009799382.1| | 3e-111 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 |
JMFF017L24 | Sequence | 565 | 006368 (6) | ref|NP_001275147.1| | 5e-79 | phosphatidate cytidylyltransferase 1 [Solanum tuberosum] sp|O04940.1|CDS1_SOLTU | 775 | 001374 (6) | ref|XP_009799382.1| | 2e-100 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 |
JMFF022E13 | Sequence | 454 | 006368 (6) | ref|XP_009799382.1| | 3e-69 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 | 734 | 001374 (6) | ref|XP_009799382.1| | 6e-114 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 |
JMSF004J03 | Sequence | 235 | 006368 (6) | ||||||||
JMSF015N19 | Sequence | 495 | 006368 (6) | ref|XP_009599330.1| | 2e-62 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana tomentosiformis] ref|XP | 770 | 001374 (6) | ref|XP_009799382.1| | 2e-109 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 |
JMSF025J23 | Sequence | 685 | 006368 (6) | ref|NP_001275147.1| | 6e-104 | phosphatidate cytidylyltransferase 1 [Solanum tuberosum] sp|O04940.1|CDS1_SOLTU | 785 | 001374 (6) | ref|XP_009799382.1| | 4e-97 | PREDICTED: phosphatidate cytidylyltransferase [Nicotiana sylvestris] ref|XP_0097 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006368============================================ 687 ============================================Contig001374============================================ 925 90 -------------------------------------------------------------------------------------->JMSF025J23 <----------------------------------------------------------------------------------rJMSF025J23 97 --------------------------------------------------------------------->JMFF017L24 <-----------------------------------------------------------------------------------rJMFF017L24 165 ---------------------------------------------------------->JMSF015N19 <--------------------------------------------------------------------------------rJMSF015N19 260 ------------------------------------------------------------------------>JMFF012E21 <---------------------------------------------------------------------------------rJMFF012E21 261 -------------------------------------------------------------->JMFF022E13 <-----------------------------------------------------------------------------rJMFF022E13 --------------------------------->JMSF004J03- <-------------------------------------------------------------------------rJMSF029L12*