| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF014P11 | Sequence | 521 | 010263 (5) | ref|XP_009601923.1| | 3e-25 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 792 | 007198 (9) | ref|XP_009801460.1| | 6e-103 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic |
| JMFF018H22 | Sequence | 544 | 010263 (5) | ref|XP_009601923.1| | 3e-28 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 751 | 007198 (9) | emb|CBI27495.3| | 3e-85 | unnamed protein product [Vitis vinifera] |
| JMFF033O03 | Sequence | 504 | 010263 (5) | ref|XP_009601923.1| | 2e-16 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 750 | 007198 (9) | ref|XP_009801460.1| | 2e-103 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic |
| JMFF041N24 | Sequence | 631 | 010263 (5) | ref|XP_009801460.1| | 1e-46 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 575 | 007198 (9) | emb|CAN71209.1| | 5e-50 | hypothetical protein VITISV_030057 [Vitis vinifera] |
| JMFF044F13 | Sequence | 645 | 010263 (5) | ref|XP_009801460.1| | 3e-45 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 628 | 007198 (9) | emb|CDP07966.1| | 5e-75 | unnamed protein product [Coffea canephora] |
| JMFN011G06 | Sequence | 504 | 007198 (9) | emb|CAN71209.1| | 1e-40 | hypothetical protein VITISV_030057 [Vitis vinifera] | |||||
| JMSF040L16 | Sequence | 697 | 007198 (9) | ref|XP_009801460.1| | 1e-122 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | 816 | 007198 (9) | emb|CDP07966.1| | 1e-92 | unnamed protein product [Coffea canephora] |
| JMSF043C17 | Sequence | 773 | 007198 (9) | ref|XP_009801460.1| | 4e-114 | PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig010263============================================ 714 ============================================Contig007198============================================ 970 143 --------------------------------------------------------------------------------------->JMFF041N24 <------------------------------------------------------rJMFF041N24 143 ------------------------------------------------------------------------>JMFF014P11 <---------------------------------------------------------------------------------rJMFF014P11 146 ---------------------------------------------------------------------->JMFF033O03 <---------------------------------------------------------------------------rJMFF033O03 198 ----------------------------------------------------------------------------------------->JMFF044F13 <-------------------------------------------------------------rJMFF044F13 206 --------------------------------------------------------------------------->JMFF018H22 <-----------------------------------------------------------------------------rJMFF018H22 --------------------------------------------------->JMFN011G06- <-------------------------------------------------------------------------------rJMSF043C17- ----------------------------------------------------------------------->JMSF040L16** <-----------------------------------------------------------------------------------rJMSF040L16**