| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001K24 | Sequence | 120 | 006959 (17) | 726 | 006959 (17) | ref|XP_007013686.1| | 1e-45 | RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super | |||
| JMFF006N08 | Sequence | 531 | 006959 (17) | emb|CBI25596.3| | 7e-25 | unnamed protein product [Vitis vinifera] | 748 | 006959 (17) | ref|XP_007013686.1| | 4e-60 | RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super |
| JMFF020P13 | Sequence | 606 | 005155 (12) | 782 | 005155 (12) | ref|XP_011080446.1| | 1e-100 | PREDICTED: F-box protein At2g32560-like [Sesamum indicum] | |||
| JMFF039I09 | Sequence | 610 | 005155 (12) | 710 | 005155 (12) | ref|XP_011080446.1| | 6e-82 | PREDICTED: F-box protein At2g32560-like [Sesamum indicum] | |||
| JMFF043A07 | Sequence | 647 | 006959 (17) | emb|CAN73727.1| | 6e-54 | hypothetical protein VITISV_034074 [Vitis vinifera] | 646 | 006959 (17) | ref|XP_007013686.1| | 8e-30 | RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super |
| JMFF045G05 | Sequence | 611 | 005155 (12) | ref|XP_009590639.1| | 9e-51 | PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis] | 557 | 006959 (17) | ref|XP_007015245.1| | 2e-25 | F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro |
| JMFN006E04 | Sequence | 627 | 006959 (17) | ref|XP_002266038.1| | 2e-57 | PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106 | |||||
| JMFN006J07 | Sequence | 628 | 006959 (17) | ref|XP_002266038.1| | 5e-57 | PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106 | |||||
| JMFS145F07 | Sequence | 613 | 005155 (12) | ||||||||
| JMSF009P14 | Sequence | 222 | 006959 (17) | emb|CBI25596.3| | 1e-06 | unnamed protein product [Vitis vinifera] | 708 | 006959 (17) | ref|XP_002266038.1| | 2e-60 | PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106 |
| JMSF013K17 | Sequence | 556 | 005155 (12) | 699 | 006959 (17) | ref|XP_007015245.1| | 8e-25 | F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro | |||
| JMSF021N19 | Sequence | 645 | 006959 (17) | ref|XP_002266038.1| | 5e-42 | PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106 | 711 | 006959 (17) | ref|XP_002266038.1| | 2e-33 | PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106 |
| JMSF030H23 | Sequence | 673 | 005155 (12) | 693 | 005155 (12) | ref|XP_009794988.1| | 3e-82 | PREDICTED: F-box protein At2g26850-like [Nicotiana sylvestris] | |||
| JMSF031K11 | Sequence | 680 | 005155 (12) | ref|XP_009794988.1| | 3e-94 | PREDICTED: F-box protein At2g26850-like [Nicotiana sylvestris] | 730 | 006959 (17) | ref|XP_007015245.1| | 1e-24 | F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro |
| JMSF036C07 | Sequence | 671 | 005155 (12) | 805 | 006959 (17) | ref|XP_007015245.1| | 2e-24 | F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro | |||
| JMSF040P11 | Sequence | 606 | 005155 (12) | ref|XP_009590639.1| | 4e-50 | PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis] | 854 | 006959 (17) | ref|XP_007015245.1| | 2e-24 | F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005155============================================1975 ============================================Contig006959============================================1832 127 --------------------------------->JMSF036C07 <-------------------------------------------rJMSF036C07 133 --------------------------->JMSF013K17 <------------------------------------rJMSF013K17 497 ----------------------------->JMFF045G05 <-----------------------------rJMFF045G05 607 ------------------------------>JMSF040P11 <--------------------------------------rJMSF040P11 1171 -------------------------->JMSF031K11 <--------------------------------------rJMSF031K11 ------------------------------>JMFS145F07- --------------------------------->JMFN006E04- --------------------------------->JMFN006J07- <-----------------------------------rJMFF039I09** <----------------------rJMSF030H23** -------------------------------->JMSF030H23** <---------------------------------------rJMFF020P13** ------------------------------>JMFF020P13** ------------------------------>JMFF039I09** ---------------------------->JMFF006N08** <-------------------------------rJMFF043A07** ---------------------------------->JMFF043A07** ----->JMFF001K24** <---------------------------------------rJMFF001K24** ----------->JMSF009P14** <--------------------------------------rJMSF009P14** <----------------------------------------rJMFF006N08** ---------------------------------->JMSF021N19** <--------------------------------------rJMSF021N19**