Contig 006959:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K24Sequence120006959 (17)726006959 (17)ref|XP_007013686.1|1e-45RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super
JMFF006N08Sequence531006959 (17)emb|CBI25596.3|7e-25unnamed protein product [Vitis vinifera]748006959 (17)ref|XP_007013686.1|4e-60RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super
JMFF043A07Sequence647006959 (17)emb|CAN73727.1|6e-54hypothetical protein VITISV_034074 [Vitis vinifera]646006959 (17)ref|XP_007013686.1|8e-30RING/U-box superfamily protein [Theobroma cacao] gb|EOY31305.1| RING/U-box super
JMFF045G05Sequence611005155 (12)ref|XP_009590639.1|9e-51PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis]557006959 (17)ref|XP_007015245.1|2e-25F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro
JMFN006E04Sequence627006959 (17)ref|XP_002266038.1|2e-57PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106
JMFN006J07Sequence628006959 (17)ref|XP_002266038.1|5e-57PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106
JMSF009P14Sequence222006959 (17)emb|CBI25596.3|1e-06unnamed protein product [Vitis vinifera]708006959 (17)ref|XP_002266038.1|2e-60PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106
JMSF013K17Sequence556005155 (12)699006959 (17)ref|XP_007015245.1|8e-25F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro
JMSF021N19Sequence645006959 (17)ref|XP_002266038.1|5e-42PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106711006959 (17)ref|XP_002266038.1|2e-33PREDICTED: E3 ubiquitin-protein ligase arkadia-like [Vitis vinifera] ref|XP_0106
JMSF031K11Sequence680005155 (12)ref|XP_009794988.1|3e-94PREDICTED: F-box protein At2g26850-like [Nicotiana sylvestris]730006959 (17)ref|XP_007015245.1|1e-24F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro
JMSF036C07Sequence671005155 (12)805006959 (17)ref|XP_007015245.1|2e-24F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro
JMSF040P11Sequence606005155 (12)ref|XP_009590639.1|4e-50PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis]854006959 (17)ref|XP_007015245.1|2e-24F-box family protein isoform 1 [Theobroma cacao] gb|EOY32864.1| F-box family pro

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF006N08- ATCAACAAACTCACTTTCACAGAAGCTTCCCT
                      ____________________________________________________________
consensus ATCAACAAACTCACTTTCACAGAAGCTTCCCT
 
. : . : . : . : . : . :
JMFF006N08- CTTCCAGACATTTCTTACACTCTCTCTATATATATATAACTCCTAACAACACGCCTTTCC
                      ____________________________________________________________
consensus CTTCCAGACATTTCTTACACTCTCTCTATATATATATAACTCCTAACAACACGCCTTTCC
 
. : . : . : . : . : . :
JMSF009P14- ATTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
JMFF001K24- ATTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
JMFF006N08- TATCATTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
JMFF043A07- TTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
JMFN006J07- ATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
JMSF021N19- ATTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
rJMFF001K24+ TCATGCACAGTAACATNTTG
rJMSF009P14+ TCTTCATGCACAGTAACATCTTG
rJMFF006N08+ TAAGCGCCTCTTCATGCACAGTAACATCTTG
                      ____________________________________________________________
consensus TATCATTTTCCTTCGCTGCCCTCATCTTCTAAGCGCCTCTTCATGCACAGTAACATCTTG
 
. : . : . : . : . : . :
JMSF009P14- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
JMFF001K24- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
JMFF006N08- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
JMFF043A07- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
JMFN006J07- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
JMSF021N19- ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
rJMFF001K24+ ATTTNTTAATTCCTTCAAAAATTTATTCAATTTGNTGAGACATGGCCGGCATGNTTCCCG
JMFN006E04- ATGCTTCCCG
rJMSF009P14+ ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
rJMFF006N08+ ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
                      ____________________________________________________________
consensus ATTTCTTAATTCCTTCAAAAATTTATTCAATTTGCTGAGACATGGCCGGCATGCTTCCCG
 
. : . : . : . : . : . :
JMSF009P14- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
JMFF001K24- G
JMFF006N08- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
JMFF043A07- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
JMFN006J07- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
JMSF021N19- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
rJMFF001K24+ GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTNGGACTCAACCA
JMFN006E04- GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
rJMSF009P14+ GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
rJMFF006N08+ GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
                      ____________________________________________________________
consensus GTGTGGAGTGTGCTCGGCGGCGGAGATTTCATCAGAGCGGCGGCTTGTCGGACTCAACCA
 
. : . : . : . : . : . :
JMSF009P14- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTT
JMFF006N08- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
JMFF043A07- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
JMFN006J07- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
JMSF021N19- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACGCAAGCAAC
rJMFF001K24+ CCTTCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
JMFN006E04- CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
rJMSF009P14+ CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
rJMFF006N08+ CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
rJMSF021N19+ TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACGCAAGCAAC
                      ____________________________________________________________
consensus CC-TCCACCACCACTTCCTCCTCCACAAGAAGGTCGTCCTTTTGCCTGTACACAAGCAAC
 
. : . : . : . : . : . :
JMFF006N08- CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATGCAGCAAAGGAGTACGATT
JMFF043A07- CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
JMFN006J07- CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
JMSF021N19- CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
rJMFF001K24+ CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATGCAGCAAAGGAGTACGATT
JMFN006E04- CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
rJMSF009P14+ CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
rJMFF006N08+ CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATGCAGCAAAGGAGTACGATT
rJMSF021N19+ CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
                      ____________________________________________________________
consensus CATGATTCCCATCTCAGCTCAAGCTCAAGCTCCTCATCCATG---CAAAGGAGTACGATT
 
. : . : . : . : . : . :
JMFF006N08- GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
JMFF043A07- GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
JMFN006J07- GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
JMSF021N19- GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
rJMFF001K24+ GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
JMFN006E04- GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
rJMSF009P14+ GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
rJMFF006N08+ GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
rJMSF021N19+ GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
rJMFF043A07+ GAAGCCAAGGAAAGATTG
                      ____________________________________________________________
consensus GGGAAGGCGTACCAAGATGAGAAGCTAGGTGCTGCCGCCAGAGAAGCCAAGGAAAGATTG
 
. : . : . : . : . : . :
JMFF006N08- GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
JMFF043A07- GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
JMFN006J07- GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
JMSF021N19- GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
rJMFF001K24+ GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
JMFN006E04- GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
rJMSF009P14+ GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
rJMFF006N08+ GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
rJMSF021N19+ GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
rJMFF043A07+ GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
                      ____________________________________________________________
consensus GATGAGAGGCTGAAATCAGGTCATTGCAAATCTGACCACAAAAGGAATTGTAGAAAAACG
 
. : . : . : . : . : . :
JMFF006N08- GCAGCAGAAAAGGGGGGAAT
JMFF043A07- GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
JMFN006J07- GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
JMSF021N19- GCAGCAG-AAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
rJMFF001K24+ GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
JMFN006E04- GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
rJMSF009P14+ GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
rJMFF006N08+ GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
rJMSF021N19+ GCAGCAG-AAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
rJMFF043A07+ GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
                      ____________________________________________________________
consensus GCAGCAGAAAAGGGGGGAATGGTGATGGGAGATGTGCAGATGTTAAAGAGCAAGGCGATG
 
. : . : . : . : . : . :
JMFF043A07- AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
JMFN006J07- AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
JMSF021N19- AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
rJMFF001K24+ AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
JMFN006E04- AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
rJMSF009P14+ AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
rJMFF006N08+ AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
rJMSF021N19+ AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
rJMFF043A07+ AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
                      ____________________________________________________________
consensus AAATGGGCAAAAAAGTTGGGGTGGAAAGCGTCAGAGGAGGAGGAAGAGTGTGCCATATGT
 
. : . : . : . : . : . :
JMFF043A07- TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCNA
JMFN006J07- TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
JMSF021N19- TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
rJMFF001K24+ TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
JMFN006E04- TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
rJMSF009P14+ TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
rJMFF006N08+ TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
rJMSF021N19+ TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
rJMFF043A07+ TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
                      ____________________________________________________________
consensus TTGGACCACTTTAAGGTTGGTGAGACATTGATGCAGCTGCCATGTTCCCATAGGTTCCAC
 
. : . : . : . : . : . :
JMFF043A07- CTCAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTT
JMFN006J07- TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGT
JMSF021N19- TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAG
rJMFF001K24+ TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
JMFN006E04- TCAAGGTGTTTGCTTCCTTGGCTTGACACANATGCACATTGCCCTTGTTGTAGGATGGGG
rJMSF009P14+ TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
rJMFF006N08+ TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
rJMSF021N19+ TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
rJMFF043A07+ TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
                      ____________________________________________________________
consensus TCAAGGTGTTTGCTTCCTTGGCTTGACACAAATGCACATTGCCCTTGTTGTAGGATGGGG
 
. : . : . : . : . : . :
rJMFF001K24+ ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
JMFN006E04- ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
rJMSF009P14+ ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
rJMFF006N08+ ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
rJMSF021N19+ ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
rJMFF043A07+ ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
                      ____________________________________________________________
consensus ATTTTGTCTTCACCCTTTTAATGGTTTTTTAATTTTGGCCACGTTGAAGAAGAAAGATGG
 
. : . : . : . : . : . :
rJMFF001K24+ ACTATTATACAATCTGTAATTAGCTTGCTTGCTTGCTGTGGATTAT
JMFN006E04- ACTATTATACAATCTGTAATT
rJMSF009P14+ ACTATTATACAATCTGTAATTAGCTTGCT
rJMFF006N08+ ACTATTATACAATCTGTAATTAGCTTGCTTGCTTGCTGTGGATTATGGTTGAGAATTA
rJMSF021N19+ ACTATTATACAATCTGTAATTAGCTTGCTTGCTTGCTGTGGATTATGGTTGAGAATTAAT
rJMFF043A07+ ACTATTATACAATCTGTAATTAGCTTGCTTGCTTGCTGTGGATTATGGTTGAGAATTAAT
                      ____________________________________________________________
consensus ACTATTATACAATCTGTAATTAGCTTGCTTGCTTGCTGTGGATTATGGTTGAGAATTAAT
 
. : . : . : . : . : . :
rJMSF021N19+ ATATATAGCCCTGTTTGGTAAAATGGCTGTTAGTTGATAGTTGATAGCTGTTAGCTGATT
rJMFF043A07+ ATATATAGCCCTGTTTGGTAAAATGGCTGTTAGTTGATAGTTGATAGCTGTTAGCTGATT
                      ____________________________________________________________
consensus ATATATAGCCCTGTTTGGTAAAATGGCTGTTAGTTGATAGTTGATAGCTGTTAGCTGATT
 
. : . : . : . : . : . :
rJMSF021N19+ GTGTTAATTAGAGGGTATAAATAGTTAATAACATTAGCTGATTGTAGAAAAACGTTT
rJMFF043A07+ GTGTTAATTAGAGGGTATAAATAGTTAATAACATTAGCTGATTGTAGAAAAACGTTTGGT
rJMSF031K11+ GGGTATAATTAGTTAATAACATTAGCTGATTGTAGAAAAGTGTTTGGT
rJMSF036C07+ GGGTATAATTAGTTAATANCATTAGCTGANTGTAGAAAAGTGTTTGGT
                      ____________________________________________________________
consensus GTGTTAATTAGAGGGTATAATTAGTTAATAACATTAGCTGATTGTAGAAAAGTGTTTGGT
 
. : . : . : . : . : . :
rJMFF043A07+ AAATTAGCTGTTTGGTATAATTT
rJMSF031K11+ AAATTAGCTGTTTGGTATAATTTTTTTTCTTAAAAAGCTAATTGAAAAAGTTGCTTTGAG
rJMSF040P11+ TAGCTGTTTGGTATAATTTTTTTTCTTAAAAAGCTAATTGAAAAAGTTGCTTTGAG
rJMSF036C07+ AAATTAGCTGTTTGGTATAA-TTTTTTTCTTAAAAAGCTNATTGAAAAAGTTGCTTTGAG
                      ____________________________________________________________
consensus AAATTAGCTGTTTGGTATAATTTTTTTTCTTAAAAAGCTAATTGAAAAAGTTGCTTTGAG
 
. : . : . : . : . : . :
rJMSF031K11+ CAGCTTTTTGAATTTTAACATTTTAGAGTTGCAAAAAGCTAATTAACCAAATACTTATAT
rJMSF040P11+ CAGCTTTTTGAATTTTAACATTTTAGAGTTGCAAAAAGCTAATTAACCAAATACTTATAT
rJMSF013K17+ TTTTTGAATTTTAACATTTTAGAGTTGCAAAAAGCTAATTAACCAAATACTTATAT
rJMSF036C07+ CAGCTTTTTGAATTTTAACATTTTAGAGTTGCAAAAAGCTAATTAACCAAATACTTATAT
                      ____________________________________________________________
consensus CAGCTTTTTGAATTTTAACATTTTAGAGTTGCAAAAAGCTAATTAACCAAATACTTATAT
 
. : . : . : . : . : . :
rJMSF031K11+ TGATTTTTAACCAAATCAAAAAGCTGATAGTAGTCAAATAAGCTAAAATTAACCTATAGG
rJMSF040P11+ TGATTTTTAACCAAATCAAAAAGCTGATAGTAGTCAAATAAGCTAAAATTAACCTATAGG
rJMSF013K17+ TGATTTTTAACCAAATCAAAAAGCTGATAGTAGTCAAATAAGCTAAAATTAACCTATAGG
rJMSF036C07+ TGATTTTTAACCAAATCAAAAAGCTGATAGTAGTCAAATAAGCTAAAATTAACCTATAGG
                      ____________________________________________________________
consensus TGATTTTTAACCAAATCAAAAAGCTGATAGTAGTCAAATAAGCTAAAATTAACCTATAGG
 
. : . : . : . : . : . :
rJMSF031K11+ CTAACTATTTTACCAAACAAGCCAGTATGTTTGTGTCTGTCATTCTTTGTTAATTAAATA
rJMSF040P11+ CTAACTATTTTACCAAACAAGCCAGTATGTTTGTGTCTGTCATTCTTTGTTAATTAAATA
rJMSF013K17+ CTAACTATTTTACCAAACAAGCCAGTATGTTTGTGTCTGTCATTCTTTGTTAATTAAATA
rJMSF036C07+ CTAACTATTTTACCAAACAAGCCAGTATGTTTGTGTCTGTCATTCTTTGTTAATTAAATA
                      ____________________________________________________________
consensus CTAACTATTTTACCAAACAAGCCAGTATGTTTGTGTCTGTCATTCTTTGTTAATTAAATA
 
. : . : . : . : . : . :
rJMSF031K11+ TGACCACAAAGCTAATAAACAATTGTGGGTGAGGGTAGATCTTGAAAAGTGAAAACCTCT
rJMSF040P11+ TGACCACAAAGCTAATAAACAATTGTGGGTGAGGGTAGATCTTGAAAAGTGAAAACCTCT
rJMSF013K17+ TGACCACAAAGCTAATAAACAATTGTGGGTGAGGGTAGATCTTGAAAAGTGAAAACCTCT
rJMSF036C07+ TGACCACAAAGCTAATAAACAATTGTGGGTGAGGGTAGATCTTGAAAAGTGAAAACCTCT
rJMFF045G05+ TGAAAAGTGAAAACCTCT
                      ____________________________________________________________
consensus TGACCACAAAGCTAATAAACAATTGTGGGTGAGGGTAGATCTTGAAAAGTGAAAACCTCT
 
. : . : . : . : . : . :
rJMSF031K11+ TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
rJMSF040P11+ TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
rJMSF013K17+ TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
rJMSF036C07+ TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
rJMFF045G05+ TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
                      ____________________________________________________________
consensus TATTCTGGCCATCTCATATGCTGTGCAGATACTGTAGTGCTCGAGTTCAATCAGTATTCA
 
. : . : . : . : . : . :
rJMSF031K11+ CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
rJMSF040P11+ CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
rJMSF013K17+ CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
rJMSF036C07+ CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
rJMFF045G05+ CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
                      ____________________________________________________________
consensus CCTGGTTCGCGGTGGAGAAGAACAACCGTTAGCAGAAAAGACCATCGTGAGGAAGGAAAC
 
. : . : . : . : . : . :
rJMSF031K11+ GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
rJMSF040P11+ GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
rJMSF013K17+ GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
rJMSF036C07+ GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
rJMFF045G05+ GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
                      ____________________________________________________________
consensus GAGGCAGAAGGGTTCTACGGAGGAATCCAGAAAGTTGAAAGCCGCGAAGTGATCTCTACG
 
. : . : . : . : . : . :
rJMSF031K11+ TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
rJMSF040P11+ TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
rJMSF013K17+ TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
rJMSF036C07+ TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
rJMFF045G05+ TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
                      ____________________________________________________________
consensus TGGAAGCGGCTATGGCCTGCTCAAGTCCTGGAATAGATTGCCAGAACAGGCACACTTGAA
 
. : . : . : . : . : . :
rJMSF031K11+ ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
rJMSF040P11+ ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
rJMSF013K17+ ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
rJMSF036C07+ ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
rJMFF045G05+ ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
                      ____________________________________________________________
consensus ATAGCAGTTTTTAGGGGAAGAATTGAAGAAATCCAATGAAGTCTACATTTTCATGAGGTT
 
. : . : . : . : . : . :
rJMSF031K11+ ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
rJMSF040P11+ ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
rJMSF013K17+ ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
rJMSF036C07+ ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
rJMFF045G05+ ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
                      ____________________________________________________________
consensus ATTCTTTTTAGTGGTCAGTGGGTAAAACCGTAAAAACTTCATACCTTTGTAGGGGTGTTT
 
. : . : . : . : . : . :
rJMSF031K11+ GACACTGTAATTCT
rJMSF040P11+ GACACTGTAATTCTGTAAATTGCATCTTGTCCAGATCCAAATCCATGGAC
rJMSF013K17+ GACACTGTAATTCTGTAAATTGCATCTTGTCCAGATCCAAATCCATGGACCTGTAATTGC
rJMSF036C07+ GACACTGTAATTCTGTAAATTGCATCTTGTCCAGATCCAAATCCATGGA-CTGTAATTGC
rJMFF045G05+ GACACTGTAATTCTGTAAATTGCATCTTGTCCAGATCCAAATCCATGGA-CTGTAATTGC
                      ____________________________________________________________
consensus GACACTGTAATTCTGTAAATTGCATCTTGTCCAGATCCAAATCCATGGACCTGTAATTGC
 
. : . : . : . : . : . :
rJMSF013K17+ CACAGTGCACTGCAGTTGTCCAGTT
rJMSF036C07+ CACAGTGCACTGCAGTTGTCCAGTTAATCTT
rJMFF045G05+ CACAGTGCACTGCAGTTGTCCAGTTAATCTTATTGAACTAAAGCAATAGATTTTAAAATC
                      ____________________________________________________________
consensus CACAGTGCACTGCAGTTGTCCAGTTAATCTTATTGAACTAAAGCAATAGATTTTAAAATC
 
. : . : . : . : . : . :
rJMFF045G05+ GTTCTCAGATTTCCCXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus GTTCTCAGATTTCCCNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG