List of clones in pair P000535.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P23Sequence530001739 (19)ref|XP_002304950.2|5e-50hypothetical protein POPTR_0004s01900g, partial [Populus trichocarpa] gb|EEE8546746012656 (5)emb|CAN68643.1|1e-76hypothetical protein VITISV_030810 [Vitis vinifera]
JMFF016F23Sequence526001739 (19)ref|XP_011037697.1|4e-49PREDICTED: beta-glucosidase 46-like [Populus euphratica]741012656 (5)emb|CAN68643.1|9e-87hypothetical protein VITISV_030810 [Vitis vinifera]
JMSF020H15Sequence685001739 (19)ref|XP_011037693.1|1e-74PREDICTED: beta-glucosidase 46-like [Populus euphratica]781012656 (5)emb|CAN68643.1|2e-77hypothetical protein VITISV_030810 [Vitis vinifera]
JMSF029O10Sequence640001739 (19)ref|XP_007026020.1|1e-68Beta glucosidase 46, putative [Theobroma cacao] gb|EOY28642.1| Beta glucosidase 732012656 (5)emb|CAN68643.1|4e-72hypothetical protein VITISV_030810 [Vitis vinifera]
JMSF047L07Sequence694001739 (19)ref|XP_011037693.1|3e-75PREDICTED: beta-glucosidase 46-like [Populus euphratica]796012656 (5)emb|CAN68643.1|4e-97hypothetical protein VITISV_030810 [Vitis vinifera]

Contig 1739 BLAST Hits against nr-aa DB Show

Contig 12656 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001739============================================ 705         ============================================Contig012656============================================ 874
  11  ------------------------------------------------------------------------------------------>JMSF029O10                           <-----------------------------------------------------------------------------------rJMSF029O10  
  19  ----------------------------------------------------------------------------------------------->JMSF020H15                        <--------------------------------------------------------------------------------rJMSF020H15  
  28   -------------------------------------------------------------------------->JMFF010P23                                       <------------------------------------------------------------------------------------rJMFF010P23  
  89   -------------------------------------------------------------------------->JMFF016F23                                <------------------------------------------------------------------------------------rJMFF016F23  
  91   ------------------------------------------------------------------------------------------------->JMSF047L07   <------------------------------------------------------------------------------------------rJMSF047L07  
       -------------------------------------------------------------------------------------->JMFF040O19*             
       ---------------------------------------------------------------------------------------->JMFF045J17*           
     ------------------------------------------------------------------------------>JMFF037H06*                       
       ------------------------------------------------------------------------->JMFF035J21*                          
      ------------------------------------------------------>JMFF033C14*                                              
      --------------------------------------------------------------------------->JMFF029M24*                         
                         -------------------------------------->JMSF013A08*                                           
       ----------------------------------------------------------------------------------------------->JMSF035O08*    
       ----------------------------------------------------------------------------------------->JMFS152A07-          
                            -------------------------------------------------------->JMSF042A03*                      
      ------------------------------------------------------------->JMSF019M18*                                       
      --------------------------------------------------->JMFF048F11#                                                 
      --------------------------------------------------------------------------->JMFF030P18*                         
      -------------------------------------------------------------------------------------->JMFF012E18*