| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010P23 | Sequence | 530 | 001739 (19) | ref|XP_002304950.2| | 5e-50 | hypothetical protein POPTR_0004s01900g, partial [Populus trichocarpa] gb|EEE8546 | 746 | 012656 (5) | emb|CAN68643.1| | 1e-76 | hypothetical protein VITISV_030810 [Vitis vinifera] |
| JMFF016F23 | Sequence | 526 | 001739 (19) | ref|XP_011037697.1| | 4e-49 | PREDICTED: beta-glucosidase 46-like [Populus euphratica] | 741 | 012656 (5) | emb|CAN68643.1| | 9e-87 | hypothetical protein VITISV_030810 [Vitis vinifera] |
| JMSF020H15 | Sequence | 685 | 001739 (19) | ref|XP_011037693.1| | 1e-74 | PREDICTED: beta-glucosidase 46-like [Populus euphratica] | 781 | 012656 (5) | emb|CAN68643.1| | 2e-77 | hypothetical protein VITISV_030810 [Vitis vinifera] |
| JMSF029O10 | Sequence | 640 | 001739 (19) | ref|XP_007026020.1| | 1e-68 | Beta glucosidase 46, putative [Theobroma cacao] gb|EOY28642.1| Beta glucosidase | 732 | 012656 (5) | emb|CAN68643.1| | 4e-72 | hypothetical protein VITISV_030810 [Vitis vinifera] |
| JMSF047L07 | Sequence | 694 | 001739 (19) | ref|XP_011037693.1| | 3e-75 | PREDICTED: beta-glucosidase 46-like [Populus euphratica] | 796 | 012656 (5) | emb|CAN68643.1| | 4e-97 | hypothetical protein VITISV_030810 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF047L07+ CACTGCAGACCAAGCTGCAGCTGAGAGAGCTCAT
____________________________________________________________
consensus CACTGCAGACCAAGCTGCAGCTGAGAGAGCTCAT
. : . : . : . : . : . :
rJMSF047L07+ TCCTTCTTGTCAAACTGGTTCTTGGACCCAATCATATATGGATCATATCCCAAAGACATG
rJMFF016F23+ GGACCCAATCATATATGGATCATATCCCAAAGACATG
____________________________________________________________
consensus TCCTTCTTGTCAAACTGGTTCTTGGACCCAATCATATATGGATCATATCCCAAAGACATG
. : . : . : . : . : . :
rJMSF047L07+ AAAGATATTTTGGGGTCAAATTTACCAGAGTTTTCAAGTATTGACCTGGAAAAGTTAAAA
rJMFF016F23+ AAAGATATTTTGGGGTCAAATTTACCAGAGTTTTCAAGTATTGACCTGGAAAAGTTAAAA
rJMFF010P23+ TTACCAGAGTTTTCAAGTATTGACCTGGAAAAGTTAAAA
rJMSF029O10+ GGAAAAGTTAAAA
____________________________________________________________
consensus AAAGATATTTTGGGGTCAAATTTACCAGAGTTTTCAAGTATTGACCTGGAAAAGTTAAAA
. : . : . : . : . : . :
rJMSF047L07+ GCTGCTGGAGGGTTGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
rJMFF016F23+ GCTGCTGGAGGGTTGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
rJMFF010P23+ GCTGCTGGAGGGTTGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
rJMSF020H15+ GCTGGAGGGTTGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
rJMSF029O10+ GCTGCTGGAGGG-TGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
____________________________________________________________
consensus GCTGCTGGAGGGTTGGATTTTATTGGAATCAACCATTACACAACCTATTATGCCCAAGAT
. : . : . : . : . : . :
rJMSF047L07+ TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
rJMFF016F23+ TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
rJMFF010P23+ TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
rJMSF020H15+ TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
rJMSF029O10+ TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
____________________________________________________________
consensus TGCTTGTATTCTACATGTGACCCTTCTATGACAGGAAACACCAGAGAAGAAGGTTTTGTT
. : . : . : . : . : . :
rJMSF047L07+ GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
rJMFF016F23+ GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
rJMFF010P23+ GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
rJMSF020H15+ GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
rJMSF029O10+ GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
____________________________________________________________
consensus GGCCAAAGTTTTTCCAAGGACGGCAACCTTATTGGGGAAATGGCAGGGTTAGAATATCTA
. : . : . : . : . : . :
rJMSF047L07+ GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
rJMFF016F23+ GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
rJMFF010P23+ GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
rJMSF020H15+ GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
rJMSF029O10+ GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
____________________________________________________________
consensus GTTGTTTATCCACCTGGAATGGAGAAAGTAGTAACTTATGTGAAAGAAAAATTTTCAAAC
. : . : . : . : . : . :
rJMSF047L07+ ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
rJMFF016F23+ ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
rJMFF010P23+ ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
rJMSF020H15+ ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
rJMSF029O10+ ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
____________________________________________________________
consensus ATACCACTTTATGTAACAGAAAATGGTTATTGTGACACAACCACCCCAAACTCTAGCATG
. : . : . : . : . : . :
rJMSF047L07+ GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
rJMFF016F23+ GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
rJMFF010P23+ GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
rJMSF020H15+ GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
rJMSF029O10+ GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
____________________________________________________________
consensus GAAGATGTATTGAATGATACCAAACGAGTCAAATTCTTGGCTGATTATCTAAATGCCCTT
. : . : . : . : . : . :
rJMSF047L07+ TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
rJMFF016F23+ TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
rJMFF010P23+ TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
rJMSF020H15+ TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
rJMSF029O10+ TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
____________________________________________________________
consensus TCAACTACCATCAGGAAAGGAGCAGATGTTAGAGGCTATTTTATTTGGTCGTTGTTTGAT
. : . : . : . : . : . :
rJMSF047L07+ AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
rJMFF016F23+ AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
rJMFF010P23+ AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
rJMSF020H15+ AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
rJMSF029O10+ AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
____________________________________________________________
consensus AACTTTGAGTGGTCATTTGGATACACAAAGAGATTGGGGCTTTACCAATTTGATCGTGTC
. : . : . : . : . : . :
rJMSF047L07+ ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
rJMFF016F23+ ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
rJMFF010P23+ ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
rJMSF020H15+ ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
rJMSF029O10+ ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
____________________________________________________________
consensus ACGTTAAAGAGGACTCCAAAATTATCTGCAAAATGGTACAAACAATTCATTGCAAAGAAT
. : . : . : . : . : . :
rJMSF047L07+ CAGAAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
rJMFF016F23+ CAGAAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
rJMFF010P23+ CAGGAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
rJMSF020H15+ CAGAAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
rJMSF029O10+ CAGAAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
____________________________________________________________
consensus CAGAAAGTTAACAGTAAAATGCAATTGAGAAATATGATTCTTCATCAGAATCAATGAAAT
. : . : . : . : . : . :
rJMSF047L07+ ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAAC
rJMFF016F23+ ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAACTG
rJMFF010P23+ ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAACTGTGTAGTAATAAATAAT
rJMSF020H15+ ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAACTGTGTAGTAATAAATAAT
rJMSF029O10+ ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAACTGTGTAGTAATAAATAAT
____________________________________________________________
consensus ATATAGTTCTTGTGTAAAACTCTACAAGTCCACAGATCGAACTGTGTAGTAATAAATAAT
. : . : . : . : . : . :
rJMFF010P23+ TGAGTAGAGTATCAATGCCATAAGGGCAAATTTATTGCTAAATAT
rJMSF020H15+ TGAGTAGAGTATCAATGCCATAAGGGCAAATTTATTGCTAAATATTAAAATT
rJMSF029O10+ TGAGTAGAGTATCAATGCCATAAGGGCAAATTTATTGCTAAATATTAAAATTGTAATGTT
____________________________________________________________
consensus TGAGTAGAGTATCAATGCCATAAGGGCAAATTTATTGCTAAATATTAAAATTGTAATGTT