List of clones in pair P000436.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H24Sequence492003168 (7)ref|XP_002313909.1|3e-73vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac736009710 (7)ref|XP_009760191.1|4e-54PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMFF022N10Sequence446003168 (7)gb|EYU37571.1|6e-15hypothetical protein MIMGU_mgv1a002851mg [Erythranthe guttata]742009710 (7)ref|XP_009760191.1|2e-55PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMFF028I24Sequence478003168 (7)ref|XP_002313909.1|1e-76vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac572009710 (7)emb|CBI22461.3|2e-23unnamed protein product [Vitis vinifera]
JMSF028N24Sequence712003168 (7)ref|XP_002313909.1|1e-105vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac638009710 (7)emb|CDO97275.1|1e-33unnamed protein product [Coffea canephora]
JMSF045H24Sequence689003168 (7)ref|XP_002313909.1|2e-76vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac735009710 (7)ref|XP_009760191.1|8e-47PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMSF046J16Sequence726003168 (7)ref|XP_002313909.1|4e-81vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac704009710 (7)ref|XP_009760191.1|2e-46PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]

Contig 3168 BLAST Hits against nr-aa DB Show

Contig 9710 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003168============================================ 899         ============================================Contig009710============================================ 751
  10 ------------------------------------------------->JMFF022N10                                                     <--------------------------------------------------------------------------------------------------rJMFF022N10  
  72        ------------------------------------------------------------------------------->JMSF046J16                     <---------------------------------------------------------------------------------------------rJMSF046J16  
  83        --------------------------------------------------------------------------->JMSF045H24                     <------------------------------------------------------------------------------------------------rJMSF045H24  
 170                   ------------------------------------------------------------------------------>JMSF028N24                    <------------------------------------------------------------------------------------rJMSF028N24  
 275                              ----------------------------------------------------->JMFF007H24                     <-------------------------------------------------------------------------------------------------rJMFF007H24  
 305                              ---------------------------------------------------->JMFF028I24                                        <---------------------------------------------------------------------------rJMFF028I24  
                                  ---------------------------------------------------------------------->JMFF049M08#  
                                                                                                                       <--------------------------------------------------------------------------------------------------rJMFF027H08*