Contig 009710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H24Sequence492003168 (7)ref|XP_002313909.1|3e-73vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac736009710 (7)ref|XP_009760191.1|4e-54PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMFF022N10Sequence446003168 (7)gb|EYU37571.1|6e-15hypothetical protein MIMGU_mgv1a002851mg [Erythranthe guttata]742009710 (7)ref|XP_009760191.1|2e-55PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMFF027H08Sequence576008092 (2)ref|XP_009598407.1|5e-118PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana tomentosiformis]747009710 (7)ref|XP_009760191.1|9e-55PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMFF028I24Sequence478003168 (7)ref|XP_002313909.1|1e-76vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac572009710 (7)emb|CBI22461.3|2e-23unnamed protein product [Vitis vinifera]
JMSF028N24Sequence712003168 (7)ref|XP_002313909.1|1e-105vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac638009710 (7)emb|CDO97275.1|1e-33unnamed protein product [Coffea canephora]
JMSF045H24Sequence689003168 (7)ref|XP_002313909.1|2e-76vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac735009710 (7)ref|XP_009760191.1|8e-47PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]
JMSF046J16Sequence726003168 (7)ref|XP_002313909.1|4e-81vacuolar sorting receptor protein BP-80 [Populus trichocarpa] gb|EEE87864.1| vac704009710 (7)ref|XP_009760191.1|2e-46PREDICTED: vacuolar-sorting receptor 3-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022N10+ GTGGACGAGGAAGATGGCAAGTGCACATGTC
rJMFF007H24+ GAAGATGGCAAGTGCACATGTC
rJMSF045H24+ GAAGATGGCAAGTGCACATGTC
rJMFF027H08+ GAAGATGGCAAGTGCACATGTC
                      ____________________________________________________________
consensus GTGGACGAGGAAGATGGCAAGTGCACATGTC
 
. : . : . : . : . : . :
rJMFF022N10+ CTCCAGGATTT-AAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
rJMFF007H24+ CTCCAGGATTT-AAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
rJMSF045H24+ CTCCAGGATTTAAAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
rJMSF046J16+ TT-AAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
rJMFF027H08+ CTCCAGGATTT-AAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
                      ____________________________________________________________
consensus CTCCAGGATTT-AAAGGAGACGGCAAAAGTTGTCAAGATATTGATGAATGCAAGGAAAAG
 
. : . : . : . : . : . :
rJMFF022N10+ AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
rJMFF007H24+ AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACNTGGGGTAGCTACGAATGCACT
rJMSF045H24+ AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
rJMSF028N24+ CTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
rJMFF028I24+ ACGAATGCACT
rJMSF046J16+ AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
rJMFF027H08+ AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
                      ____________________________________________________________
consensus AAAGCCTGCCAGTGCCCTGAATGCAGCTGCACAAATACCTGGGGTAGCTACGAATGCACT
 
. : . : . : . : . : . :
rJMFF022N10+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMFF007H24+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMSF045H24+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMSF028N24+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMFF028I24+ TGTAGCAGTGACTTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMSF046J16+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
rJMFF027H08+ TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
                      ____________________________________________________________
consensus TGTAGCAGTGACCTACTGTACATGAGAGACCACGATACTTGCATTAGTAAGAAGGCTGCG
 
. : . : . : . : . : . :
rJMFF022N10+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMFF007H24+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMSF045H24+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMSF028N24+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMFF028I24+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMSF046J16+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
rJMFF027H08+ ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
                      ____________________________________________________________
consensus ACTGAAGTCAAGTCTGCATGGACTGCTGTATTGGTCATTATTATAGGACTCGCCATGGCT
 
. : . : . : . : . : . :
rJMFF022N10+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMFF007H24+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMSF045H24+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMSF028N24+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMFF028I24+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMSF046J16+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
rJMFF027H08+ GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
                      ____________________________________________________________
consensus GCTGGTGGGGCATATCTTGTATACAAATATAGATTTAGGTCATACATGGACACTGAGATC
 
. : . : . : . : . : . :
rJMFF022N10+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMFF007H24+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMSF045H24+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMSF028N24+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMFF028I24+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMSF046J16+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
rJMFF027H08+ AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
                      ____________________________________________________________
consensus AGGGCCATAATGGCGCAATACATGCCACTCGACAGCCAAAATGAAGTTCCATACCATGTT
 
. : . : . : . : . : . :
rJMFF022N10+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMFF007H24+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMSF045H24+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMSF028N24+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMFF028I24+ TNTGATGACCGTACNTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMSF046J16+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
rJMFF027H08+ TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
                      ____________________________________________________________
consensus TCTGATGACCGTACCTGAAGGATGGATACTTGTCGCTATGCATCCAAGAATGAAGTTCCC
 
. : . : . : . : . : . :
rJMFF022N10+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMFF007H24+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMSF045H24+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMSF028N24+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMFF028I24+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMSF046J16+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
rJMFF027H08+ GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
                      ____________________________________________________________
consensus GGAACTTTGTAAAAACTGTGCAGGAGAAAGGGAAGCCTCTAATCATTACCATTCTTTCAG
 
. : . : . : . : . : . :
rJMFF022N10+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMFF007H24+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMSF045H24+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMSF028N24+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMFF028I24+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMSF046J16+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
rJMFF027H08+ AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
                      ____________________________________________________________
consensus AATCATTGCACAGGGATCAAATGCCTCTTTTCCTATCAAGGGTTGGTAAAATTATTTGGG
 
. : . : . : . : . : . :
rJMFF022N10+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMFF007H24+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMSF045H24+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMSF028N24+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMFF028I24+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMSF046J16+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
rJMFF027H08+ AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
                      ____________________________________________________________
consensus AGAGTTGTAAATTATGTCAGACAATAAACTTATAAACATCTTGTTTGGTGTCTTGTAACG
 
. : . : . : . : . : . :
rJMFF022N10+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMFF007H24+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMSF045H24+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMSF028N24+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMFF028I24+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMSF046J16+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
rJMFF027H08+ TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
                      ____________________________________________________________
consensus TTGTGAGCTAGGAATTAGCTAAGGTGCACCAGGGAATGTGGGGTTATGTAGATCCCCTCT
 
. : . : . : . : . : . :
rJMFF022N10+ ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAATC
rJMFF007H24+ ATGGTGGATGCTTNTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAAT
rJMSF045H24+ ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAA
rJMSF028N24+ ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAATCAG
rJMFF028I24+ ATGGTGGATGCTTTTAACGAG
rJMSF046J16+ ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAATCAG
rJMFF027H08+ ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAATCAGTACATT
                      ____________________________________________________________
consensus ATGGTGGATGCTTTTAACGAGTGCAATTGTTTTTCTTATGCAACAGGAAATCAGTACATT