List of clones in pair P000404.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS048G11Sequence590010727 (10)ref|XP_010534036.1|1e-20PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya
JMFS056C10Sequence623010727 (10)ref|XP_010534036.1|6e-29PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya
JMFS056D01Sequence479010727 (10)ref|XP_010534036.1|4e-08PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya
JMFS149E07Sequence553010727 (10)gb|EYU30343.1|4e-36hypothetical protein MIMGU_mgv1a0026501mg, partial [Erythranthe guttata]
JMSF025L24Sequence396010727 (10)751011400 (6)ref|XP_009604778.1|3e-75PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia
JMSF025M09Sequence676010727 (10)ref|XP_010534036.1|4e-24PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya 791011400 (6)ref|XP_009604778.1|3e-55PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia
JMSF029I13Sequence593010727 (10)ref|XP_010534036.1|1e-09PREDICTED: cationic amino acid transporter 2, vacuolar-like, partial [Tarenaya 724011400 (6)ref|XP_009604778.1|9e-61PREDICTED: cationic amino acid transporter 2, vacuolar-like isoform X1 [Nicotia
JMSF042H24Sequence700010727 (10)emb|CDP17637.1|5e-73unnamed protein product [Coffea canephora]700011400 (6)gb|AAN77151.1|9e-45fiber protein Fb12 [Gossypium barbadense]
JMSF050J01Sequence619010727 (10)ref|XP_011069954.1|1e-24PREDICTED: cationic amino acid transporter 2, vacuolar isoform X2 [Sesamum indi742011400 (6)emb|CDP17637.1|2e-58unnamed protein product [Coffea canephora]
JMSF052B04Sequence679010727 (10)ref|XP_006391600.1|1e-70hypothetical protein EUTSA_v10023348mg [Eutrema salsugineum] gb|ESQ28886.1| hypo804011400 (6)emb|CDP17637.1|3e-60unnamed protein product [Coffea canephora]

Contig 10727 BLAST Hits against nr-aa DB Show

Contig 11400 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010727============================================ 923         ============================================Contig011400============================================ 805
   7 ------------------------------------------------------------------------>JMSF025M09                                     <-------------------------------------------------------------------------------------------rJMSF025M09  
  64 ------------------------------------------>JMSF025L24                                                            <--------------------------------------------------------------------------------------------rJMSF025L24  
  83 ------------------------------------------------------->JMSF029I13                                                      <----------------------------------------------------------------------------------rJMSF029I13  
  98        ------------------------------------------------------------------>JMSF050J01                                 <------------------------------------------------------------------------------------------rJMSF050J01  
 224                         --------------------------------------------------------------------------->JMSF042H24                <--------------------------------------------------------------------------------------rJMSF042H24  
 230                         ------------------------------------------------------------------------>JMSF052B04      <--------------------------------------------------------------------------------------------------rJMSF052B04  
             --------------------------------------------------->JMFS056D01-                                          
                         ----------------------------------------------------------->JMFS149E07-                      
             --------------------------------------------------------------->JMFS048G11-                              
             ------------------------------------------------------------------->JMFS056C10-