List of clones in pair P000403.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M18Sequence592002400 (9)ref|XP_009773747.1|1e-15PREDICTED: homeobox-leucine zipper protein HAT5-like [Nicotiana sylvestris]674001030 (6)ref|XP_006367068.1|2e-25PREDICTED: homeobox-leucine zipper protein HOX16-like [Solanum tuberosum]
JMFF037B11Sequence587002400 (9)ref|XP_009773747.1|7e-16PREDICTED: homeobox-leucine zipper protein HAT5-like [Nicotiana sylvestris]720001030 (6)ref|XP_009773747.1|4e-25PREDICTED: homeobox-leucine zipper protein HAT5-like [Nicotiana sylvestris]
JMFS030C05Sequence618002400 (9)
JMFS155B02Sequence607002400 (9)
JMSF008G14Sequence451002400 (9)ref|XP_006344890.1|155PREDICTED: protein TIC 20-v, chloroplastic-like [Solanum tuberosum]743001030 (6)ref|XP_006367068.1|3e-26PREDICTED: homeobox-leucine zipper protein HOX16-like [Solanum tuberosum]
JMSF041L17Sequence726002400 (9)ref|XP_006344890.1|205PREDICTED: protein TIC 20-v, chloroplastic-like [Solanum tuberosum]732001030 (6)ref|XP_009773747.1|3e-26PREDICTED: homeobox-leucine zipper protein HAT5-like [Nicotiana sylvestris]
JMSF047I09Sequence400002400 (9)759001030 (6)ref|XP_006367068.1|1e-36PREDICTED: homeobox-leucine zipper protein HOX16-like [Solanum tuberosum]
JMSF048D22Sequence611002400 (9)758001030 (6)ref|XP_006367068.1|7e-42PREDICTED: homeobox-leucine zipper protein HOX16-like [Solanum tuberosum]

Contig 2400 BLAST Hits against nr-aa DB Show

Contig 1030 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002400============================================1612         ============================================Contig001030============================================ 762
  23 -------------------------------------------->JMSF041L17                                                                     <-------------------------------------------------------------------------------------rJMSF041L17  
  24 --------------------------->JMSF008G14                                                                           <------------------------------------------------------------------------------------------------rJMSF008G14  
 545                                   ------------------------>JMSF047I09                                                        <---------------------------------------------------------------------------------------rJMSF047I09  
 565                                   ------------------------------------>JMSF048D22                                           <-------------------------------------------------------------------------------------rJMSF048D22  
1021                                                                ------------------------------------>JMFF004M18               <---------------------------------------------------------------------------------------rJMFF004M18  
1022                                                                ----------------------------------->JMFF037B11                <---------------------------------------------------------------------------------------rJMFF037B11  
      ---------------------------->JMFF026L18*                                                                        
                                        ------------------------------------->JMFS030C05-                             
                                        ----------------------------------->JMFS155B02-