clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP002B01 | Sequence | 562 | 001049 (7) | ref|XP_009595630.1| | 1e-94 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] | |||||
JMFF008N10 | Sequence | 536 | 011485 (6) | ref|XP_006351482.1| | 1e-41 | PREDICTED: 4-coumarate--CoA ligase-like 9-like [Solanum tuberosum] | 780 | 001049 (7) | emb|CDP15004.1| | 5e-100 | unnamed protein product [Coffea canephora] |
JMSF016O12 | Sequence | 491 | 011485 (6) | ref|XP_006351482.1| | 2e-43 | PREDICTED: 4-coumarate--CoA ligase-like 9-like [Solanum tuberosum] | 747 | 001049 (7) | ref|XP_009609463.1| | 2e-105 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] ref|XP_009 |
JMSF037H12 | Sequence | 678 | 011485 (6) | ref|XP_009790448.1| | 4e-73 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana sylvestris] | 772 | 001049 (7) | ref|XP_009595630.1| | 5e-110 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] |
JMSF037P13 | Sequence | 675 | 011485 (6) | ref|XP_009790448.1| | 4e-73 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana sylvestris] | 756 | 001049 (7) | ref|XP_009609463.1| | 8e-98 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] ref|XP_009 |
JMSF048C08 | Sequence | 706 | 011485 (6) | ref|XP_009595630.1| | 1e-78 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] | 788 | 001049 (7) | ref|XP_009595630.1| | 7e-110 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] |
JMSF049M04 | Sequence | 684 | 011485 (6) | ref|XP_009595630.1| | 4e-76 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] | 758 | 001049 (7) | ref|XP_009595630.1| | 4e-106 | PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011485============================================ 816 ============================================Contig001049============================================ 944 2 ----------------------------------------------------------------->JMFF008N10 <--------------------------------------------------------------------------------rJMFF008N10 159 ----------------------------------------------------------->JMSF016O12 <------------------------------------------------------------------------------rJMSF016O12 166 -------------------------------------------------------------------------------->JMSF037P13 <------------------------------------------------------------------------------rJMSF037P13 166 ---------------------------------------------------------------------------------->JMSF037H12 <--------------------------------------------------------------------------------rJMSF037H12 166 ---------------------------------------------------------------------------------->JMSF049M04 <------------------------------------------------------------------------------rJMSF049M04 212 ------------------------------------------------------------------------------------->JMSF048C08 <-----------------------------------------------------------------------------------rJMSF048C08 ----------------------------------------------------------->rJMCP002B01-