Contig 011485:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N10Sequence536011485 (6)ref|XP_006351482.1|1e-41PREDICTED: 4-coumarate--CoA ligase-like 9-like [Solanum tuberosum]780001049 (7)emb|CDP15004.1|5e-100unnamed protein product [Coffea canephora]
JMSF016O12Sequence491011485 (6)ref|XP_006351482.1|2e-43PREDICTED: 4-coumarate--CoA ligase-like 9-like [Solanum tuberosum]747001049 (7)ref|XP_009609463.1|2e-105PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] ref|XP_009
JMSF037H12Sequence678011485 (6)ref|XP_009790448.1|4e-73PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana sylvestris]772001049 (7)ref|XP_009595630.1|5e-110PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis]
JMSF037P13Sequence675011485 (6)ref|XP_009790448.1|4e-73PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana sylvestris]756001049 (7)ref|XP_009609463.1|8e-98PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis] ref|XP_009
JMSF048C08Sequence706011485 (6)ref|XP_009595630.1|1e-78PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis]788001049 (7)ref|XP_009595630.1|7e-110PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis]
JMSF049M04Sequence684011485 (6)ref|XP_009595630.1|4e-76PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis]758001049 (7)ref|XP_009595630.1|4e-106PREDICTED: 4-coumarate--CoA ligase-like 9 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF048C08+                                   TTGCCGTCGGTAAATTTGGTGTTGTACAAGGTCGCC
JMSF049M04+                                                              AAGGTCGCC
JMSF037H12+                                                                 GTCGCC
                      ____________________________________________________________
consensus                                     TTGCCGTCGGTAAATTTGGTGTTGTACAAGGTCGCC
 
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JMSF048C08+           ATTAGAGCGATAAAATTCCGGTGGCTCAACTCGACGCCCTTGACTCGGCCGGTCGTACCG
JMSF049M04+           ATTAGAGCGATAAAATTCCGGTGGCTCAACTCGACGCCCTTGACTCGGCCGGTCGTACCG
JMSF037H12+           ATTAGAGCGAT-AAATTCCGGTGGCTCAACTCGACGCCCTTGACTCGGCCGGTCGTACCG
JMSF037P13+                       AAATTCCGGTGGCTCAACTCGACGCCCTTGACTCGGCCGGTCGTACCG
                      ____________________________________________________________
consensus             ATTAGAGCGATAAAATTCCGGTGGCTCAACTCGACGCCCTTGACTCGGCCGGTCGTACCG
 
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JMSF048C08+           GACGAGTAGAGAACGGTTGCAGTATCGGACTGGCGAACGAGTCGTCGGTGGGAAGAATCG
JMSF049M04+           GACGAGTAGAGAACGGTTGCAGTATCGGACTGGCGAACGAGTCGTCGGTGGGAAGAATCG
JMSF037H12+           GACGAGTAGAGAACGGTTGCAGTATCGGACTGGCGAACGAGTCGTCGGTGGGAAGAATCG
JMSF037P13+           GACGAGTAGAGAACGGTTGCAGTATCGGACTGGCGAACGAGTCGTCGGTGGGAAGAATCG
                      ____________________________________________________________
consensus             GACGAGTAGAGAACGGTTGCAGTATCGGACTGGCGAACGAGTCGTCGGTGGGAAGAATCG
 
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JMSF048C08+           TCGTGGTGAGAAGTGGGGCCCTCGAGCATCGCGGAAAAATCGGCGGAGTCTAGGATAACC
JMSF049M04+           TCGTGGTGAGAAGTGGGGCCCTCGAGCATCGCGGAAAAATCGGCGGAGTCTAGGATAACC
JMSF037H12+           TCGTGGTGAGAAGTGGGGCCCTCGAGCATCGCGGAAAAATCGGCGGAGTCTAGGATAACC
JMSF037P13+           TCGTGGTGAGAAGTGGGGCCCTCGAGCATCGCGGAAAAATCGGCGGAGTCTAGGATAACC
                      ____________________________________________________________
consensus             TCGTGGTGAGAAGTGGGGCCCTCGAGCATCGCGGAAAAATCGGCGGAGTCTAGGATAACC
 
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JMSF048C08+           GTCCCGAGAGGTAATGAAGGGAGTTTGTTGGAAGTTGCGGAAGTAGCGAAAGCGACGGCG
JMSF049M04+           GTCCCGAGAGGTAATGAAGGGAGTTTGTTGGAAGTTGCGGAAGTAGCGAAAGCGACGGCG
JMSF037H12+           GTCCCGAGAGGTAATGAAGGGAGTTTGTTGGAAGTTGCGGAAGTAGCGAAAGCGACGGCG
JMSF037P13+           GTCCCGAGAGGTAATGAAGGGAGTTTGTTGGAAGTTGCGGAAGTAGCGAAAGCGACGGCG
JMSF016O12+                                                             AGCGACGGCG
                      ____________________________________________________________
consensus             GTCCCGAGAGGTAATGAAGGGAGTTTGTTGGAAGTTGCGGAAGTAGCGAAAGCGACGGCG
 
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JMSF048C08+           GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
JMSF049M04+           GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
JMSF037H12+           GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
JMSF037P13+           GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
JMSF016O12+           GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
JMFF008N10+               TACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
                      ____________________________________________________________
consensus             GGGTTACTGAGTCGGACCATGTGAGCCAACTCGGAGGGAGTGGAGAGCGGGTTGGCAGGC
 
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JMSF048C08+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
JMSF049M04+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
JMSF037H12+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
JMSF037P13+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
JMSF016O12+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
JMFF008N10+           GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
                      ____________________________________________________________
consensus             GAAACGACGACGCCGAGAGAGAGCAGGGCGAAGTACAGAACAGGAACGTCGAGGGAGGTC
 
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JMSF048C08+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
JMSF049M04+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
JMSF037H12+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
JMSF037P13+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
JMSF016O12+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
JMFF008N10+           GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
                      ____________________________________________________________
consensus             GGAGATAGAACAAAAGCGACGTCGTTTCTAGCAAGCGAAGGAAACCGGGACCGGATAGCC
 
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JMSF048C08+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
JMSF049M04+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
JMSF037H12+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
JMSF037P13+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
JMSF016O12+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
JMFF008N10+           CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
                      ____________________________________________________________
consensus             CCGGCGAGAGCTCTGGTCCGGCGCAGGAAATCGGAGTAGGAGAGCTTCCGGTCGGTGGCG
 
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JMSF048C08+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
JMSF049M04+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
JMSF037H12+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
JMSF037P13+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
JMSF016O12+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
JMFF008N10+           GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
                      ____________________________________________________________
consensus             GCGTCAATAATGAAGGTGTCCGCAGCGGCGGTAGCCGGCGAGCGGAGCAGGGAGATGGCA
 
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JMSF048C08+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
JMSF049M04+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
JMSF037H12+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
JMSF037P13+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
JMSF016O12+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
JMFF008N10+           TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
                      ____________________________________________________________
consensus             TATTCGGCAATGGAGAGAGGCTCGTCGGCGGGAGGCAAGGAGACCGGAGGTCTGAGACTC
 
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JMSF048C08+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
JMSF049M04+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
JMSF037H12+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
JMSF037P13+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
JMSF016O12+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
JMFF008N10+           TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
                      ____________________________________________________________
consensus             TGAAAGGTCTTGGTTTCAGAGCAATAACCATTGGTGGGGTCAACAGCTCCTGGCACCGCC
 
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JMSF048C08+           ATTGAT                                                      
JMSF049M04+           ATTGATGAC                                                   
JMSF037H12+           ATTGATGAC                                                   
JMSF037P13+           ATTGATGAC                                                   
JMSF016O12+           ATTGATGACAGTTTATTGTGGTCTTCTTCCTTCACCTAAATAAATAATTATACCAA    
JMFF008N10+           ATTGATGACAGTTTATTGTGGTCTTCTTCCTTCACCTAAATAAATAATTATACCAAGGAT
                      ____________________________________________________________
consensus             ATTGATGACAGTTTATTGTGGTCTTCTTCCTTCACCTAAATAAATAATTATACCAAGGAT
 
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JMFF008N10+           GGTAATCAATACAGATTTGACAATTTTGACAAAAAAATGTCTGTTAAGTGATAAACTGAT
                      ____________________________________________________________
consensus             GGTAATCAATACAGATTTGACAATTTTGACAAAAAAATGTCTGTTAAGTGATAAACTGAT