List of clones in pair P000363.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009I18Sequence368000878 (7)ref|XP_009604694.1|6e-20PREDICTED: transcription factor MYC3-like [Nicotiana tomentosiformis]739002960 (7)ref|XP_007051457.1|8e-80Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614
JMSF011F05Sequence574002960 (7)ref|XP_011094312.1|1e-73PREDICTED: transcription factor MYC2 [Sesamum indicum]
JMSF016E14Sequence547000878 (7)ref|XP_009604694.1|1e-44PREDICTED: transcription factor MYC3-like [Nicotiana tomentosiformis]794002960 (7)ref|XP_007051457.1|9e-80Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614
JMSF035C04Sequence666000878 (7)ref|XP_007051457.1|6e-68Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614730002960 (7)ref|XP_007219048.1|8e-74hypothetical protein PRUPE_ppa004680mg [Prunus persica] gb|EMJ20247.1| hypotheti
JMSF037C11Sequence669000878 (7)ref|XP_007051457.1|3e-68Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614770002960 (7)ref|XP_007051457.1|6e-80Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614
JMSF040G14Sequence641000878 (7)ref|XP_007051457.1|2e-63Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614864002960 (7)ref|XP_007051457.1|3e-81Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614
JMSF042P24Sequence729000878 (7)ref|XP_007051457.1|7e-78Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614719002960 (7)ref|XP_007219048.1|5e-66hypothetical protein PRUPE_ppa004680mg [Prunus persica] gb|EMJ20247.1| hypotheti
JMSF047O15Sequence593000878 (7)ref|XP_007051457.1|4e-53Basic helix-loop-helix DNA-binding family protein [Theobroma cacao] gb|EOX95614

Contig 878 BLAST Hits against nr-aa DB Show

Contig 2960 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000878============================================ 729         ============================================Contig002960============================================1010
   4 --------------------------------------------------------------------------------------------------->JMSF042P24                                <----------------------------------------------------------------------rJMSF042P24  
  43 ------------------------------------------------------------------------------------------>JMSF035C04                                    <-----------------------------------------------------------------------rJMSF035C04  
 136 -------------------------------------------------------------------------->JMSF016E14                                    <------------------------------------------------------------------------------rJMSF016E14  
 148 --------------------------------------------------------------------------------------->JMSF040G14               <-------------------------------------------------------------------------------------rJMSF040G14  
 150 ------------------------------------------------------------------------------------------>JMSF037C11                     <---------------------------------------------------------------------------rJMSF037C11  
 164 ------------------------------------------------->JMSF009I18                                                                  <----------------------------------------------------------------------rJMSF009I18  
     -------------------------------------------------------------------------------->JMSF047O15-                     
                                                                                                                                        <------------------------------------------------------rJMSF011F05-