clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008N07 | Sequence | 536 | 008748 (11) | ref|XP_009610166.1| | 2e-50 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | 688 | 005678 (9) | gb|KHN43447.1| | 7e-50 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
JMFF010N09 | Sequence | 649 | 008748 (11) | ref|XP_009610165.1| | 2e-65 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento | 772 | 005678 (9) | gb|KHN43447.1| | 2e-55 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
JMFF014M03 | Sequence | 578 | 008748 (11) | ref|XP_009610165.1| | 2e-62 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento | 820 | 005678 (9) | gb|KHN43447.1| | 3e-70 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
JMFF034C07 | Sequence | 331 | 008748 (11) | ref|XP_006388444.1| | 1e-32 | hypothetical protein POPTR_0184s002102g, partial [Populus trichocarpa] gb|ERP473 | 758 | 005678 (9) | gb|KHN43447.1| | 1e-67 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
JMFF041A20 | Sequence | 633 | 008748 (11) | ref|XP_009610166.1| | 1e-72 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | 481 | 005678 (9) | gb|KHN19202.1| | 6e-26 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
JMFF043C04 | Sequence | 648 | 008748 (11) | ref|XP_009610165.1| | 5e-66 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento | 626 | 005678 (9) | ref|XP_009610165.1| | 9e-33 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X1 [Nicotiana tomento |
JMFS069B08 | Sequence | 627 | 008748 (11) | ref|XP_009610166.1| | 1e-92 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | |||||
JMFS070H02 | Sequence | 625 | 008748 (11) | ref|XP_009610166.1| | 4e-75 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | |||||
JMFS075B01 | Sequence | 627 | 008748 (11) | ref|XP_009610166.1| | 2e-71 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | |||||
JMFS101G09 | Sequence | 604 | 008748 (11) | ref|XP_009610166.1| | 7e-70 | PREDICTED: DEAD-box ATP-dependent RNA helicase 24 isoform X2 [Nicotiana tomento | |||||
JMSF009I24 | Sequence | 242 | 008748 (11) | ref|XP_006388444.1| | 7e-27 | hypothetical protein POPTR_0184s002102g, partial [Populus trichocarpa] gb|ERP473 | 743 | 005678 (9) | gb|KHN43447.1| | 7e-62 | DEAD-box ATP-dependent RNA helicase 24 [Glycine soja] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008748============================================ 739 ============================================Contig005678============================================1009 218 -------------------------------------------------------------------------------------->JMFF043C04 <-----------------------------------------------------------rJMFF043C04 227 ------------------------------------------------------------------------------------->JMFF041A20 <-----------------------------------------------rJMFF041A20 236 ------------------------------------------------------------------------>JMFF008N07 <-------------------------------------------------------------------rJMFF008N07 298 --------------------------------------------------------------------------------------->JMFF010N09 <----------------------------------------------------------------------------rJMFF010N09 300 ------------------------------->JMSF009I24 <------------------------------------------------------------------------rJMSF009I24 300 -------------------------------------------->JMFF034C07 <--------------------------------------------------------------------------rJMFF034C07 317 ---------------------------------------------------------------------------->JMFF014M03 <------------------------------------------------------------------------------rJMFF014M03 ------------------------------------------------------------------------------------>JMFS070H02- ------------------------------------------------------------------------------------>JMFS069B08- --------------------------------------------------------------------------------->JMFS101G09- ------------------------------------------------------------------------------------>JMFS075B01- <---------------------------------------------------------------------------rJMSF022A04* <----------------------------------------------------------------------------rJMSF045O02*