List of clones in pair P000331.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022L12Sequence772011178 (8)ref|NP_001182857.1|2e-61uncharacterized protein LOC100501115 precursor [Zea mays] gb|ACR34922.1| unknown
JMFF039H02Sequence522006728 (7)gb|KJB79238.1|5e-47hypothetical protein B456_013G038900 [Gossypium raimondii]763011178 (8)dbj|BAF01745.1|169putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana]
JMFF045E17Sequence628006728 (7)gb|KHG16990.1|8e-63Transmembrane 9 superfamily member 3 [Gossypium arboreum]582011178 (8)ref|XP_006385204.1|3e-27hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630
JMSF002O12Sequence245006728 (7)760011178 (8)ref|NP_001182857.1|3e-61uncharacterized protein LOC100501115 precursor [Zea mays] gb|ACR34922.1| unknown
JMSF017J01Sequence436006728 (7)ref|XP_010930775.1|97.8PREDICTED: transmembrane 9 superfamily member 1 [Elaeis guineensis] ref|XP_01093754011178 (8)dbj|BAF01745.1|191putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana]
JMSF032K14Sequence666006728 (7)gb|KHG16990.1|2e-73Transmembrane 9 superfamily member 3 [Gossypium arboreum]616011178 (8)ref|XP_006385204.1|2e-45hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630
JMSF046E03Sequence664006728 (7)gb|KHG16990.1|1e-67Transmembrane 9 superfamily member 3 [Gossypium arboreum]642011178 (8)ref|XP_006385204.1|4e-45hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630
JMSF049A20Sequence702006728 (7)gb|KHG16990.1|3e-68Transmembrane 9 superfamily member 3 [Gossypium arboreum]775011178 (8)ref|XP_006385204.1|6e-45hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630

Contig 6728 BLAST Hits against nr-aa DB Show

Contig 11178 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006728============================================ 720         ============================================Contig011178============================================ 865
  59         -------------------------------------------------------------------------------------->JMFF045E17                                         <------------------------------------------------------------------rJMFF045E17  
  80 ------------------------------------------------------------------------------------------------>JMSF049A20                   <-----------------------------------------------------------------------------rJMSF049A20  
 107     --------------------------------->JMSF002O12                                                                              <-----------------------------------------------------------------------------rJMSF002O12  
 110         ------------------------------------------------------------------------>JMFF039H02                             <--------------------------------------------------------------------------------------rJMFF039H02  
 137     ----------------------------------------------------------->JMSF017J01                                       <---------------------------------------------------------------------------------------rJMSF017J01  
 209      ------------------------------------------------------------------------------------------->JMSF046E03             <------------------------------------------------------------------------rJMSF046E03  
 232         ------------------------------------------------------------------------------------------->JMSF032K14            <----------------------------------------------------------------------rJMSF032K14  

                                                                                                                                    <-------------------------------------------------------------------------------rJMFF022L12-