clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF022L12 | Sequence | 772 | 011178 (8) | ref|NP_001182857.1| | 2e-61 | uncharacterized protein LOC100501115 precursor [Zea mays] gb|ACR34922.1| unknown | |||||
JMFF039H02 | Sequence | 522 | 006728 (7) | gb|KJB79238.1| | 5e-47 | hypothetical protein B456_013G038900 [Gossypium raimondii] | 763 | 011178 (8) | dbj|BAF01745.1| | 169 | putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] |
JMFF045E17 | Sequence | 628 | 006728 (7) | gb|KHG16990.1| | 8e-63 | Transmembrane 9 superfamily member 3 [Gossypium arboreum] | 582 | 011178 (8) | ref|XP_006385204.1| | 3e-27 | hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630 |
JMSF002O12 | Sequence | 245 | 006728 (7) | 760 | 011178 (8) | ref|NP_001182857.1| | 3e-61 | uncharacterized protein LOC100501115 precursor [Zea mays] gb|ACR34922.1| unknown | |||
JMSF017J01 | Sequence | 436 | 006728 (7) | ref|XP_010930775.1| | 97.8 | PREDICTED: transmembrane 9 superfamily member 1 [Elaeis guineensis] ref|XP_01093 | 754 | 011178 (8) | dbj|BAF01745.1| | 191 | putative endomembrane protein EMP70 precusor isolog [Arabidopsis thaliana] |
JMSF032K14 | Sequence | 666 | 006728 (7) | gb|KHG16990.1| | 2e-73 | Transmembrane 9 superfamily member 3 [Gossypium arboreum] | 616 | 011178 (8) | ref|XP_006385204.1| | 2e-45 | hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630 |
JMSF046E03 | Sequence | 664 | 006728 (7) | gb|KHG16990.1| | 1e-67 | Transmembrane 9 superfamily member 3 [Gossypium arboreum] | 642 | 011178 (8) | ref|XP_006385204.1| | 4e-45 | hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630 |
JMSF049A20 | Sequence | 702 | 006728 (7) | gb|KHG16990.1| | 3e-68 | Transmembrane 9 superfamily member 3 [Gossypium arboreum] | 775 | 011178 (8) | ref|XP_006385204.1| | 6e-45 | hypothetical protein POPTR_0003s011002g, partial [Populus trichocarpa] gb|ERP630 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006728============================================ 720 ============================================Contig011178============================================ 865 59 -------------------------------------------------------------------------------------->JMFF045E17 <------------------------------------------------------------------rJMFF045E17 80 ------------------------------------------------------------------------------------------------>JMSF049A20 <-----------------------------------------------------------------------------rJMSF049A20 107 --------------------------------->JMSF002O12 <-----------------------------------------------------------------------------rJMSF002O12 110 ------------------------------------------------------------------------>JMFF039H02 <--------------------------------------------------------------------------------------rJMFF039H02 137 ----------------------------------------------------------->JMSF017J01 <---------------------------------------------------------------------------------------rJMSF017J01 209 ------------------------------------------------------------------------------------------->JMSF046E03 <------------------------------------------------------------------------rJMSF046E03 232 ------------------------------------------------------------------------------------------->JMSF032K14 <----------------------------------------------------------------------rJMSF032K14 <-------------------------------------------------------------------------------rJMFF022L12-