List of clones in pair P000245.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010L04Sequence620009235 (9)ref|XP_011080124.1|3e-101PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch808005389 (8)ref|XP_011080124.1|3e-81PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch
JMFF016E09Sequence546009235 (9)ref|XP_011080124.1|2e-85PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch717005389 (8)emb|CDP03802.1|3e-43unnamed protein product [Coffea canephora]
JMFF016E10Sequence550009235 (9)ref|XP_011080124.1|7e-87PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch778005389 (8)ref|XP_009586626.1|1e-58PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch
JMFF017B05Sequence594009235 (9)ref|XP_011080124.1|6e-92PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch781005389 (8)emb|CDP03802.1|1e-43unnamed protein product [Coffea canephora]
JMSF001A21Sequence270009235 (9)ref|XP_002301843.1|2e-21hypothetical protein POPTR_0002s25720g [Populus trichocarpa] gb|EEE81116.1| hypo670005389 (8)emb|CDP03802.1|5e-44unnamed protein product [Coffea canephora]
JMSF011C08Sequence265009235 (9)ref|XP_002301843.1|3e-08hypothetical protein POPTR_0002s25720g [Populus trichocarpa] gb|EEE81116.1| hypo784005389 (8)ref|XP_011080124.1|8e-83PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch
JMSF026D02Sequence664009235 (9)ref|XP_011080124.1|2e-105PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch719005389 (8)ref|XP_009586626.1|2e-45PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch
JMSF040O20Sequence675009235 (9)ref|XP_011080124.1|3e-102PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch755005389 (8)ref|XP_011080124.1|2e-90PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitoch

Contig 9235 BLAST Hits against nr-aa DB Show

Contig 5389 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009235============================================ 708         ============================================Contig005389============================================ 993
 107      ---------------------------------------------------------------------------->JMFF016E09                                           <----------------------------------------------------------------------rJMFF016E09  
 121      ----------------------------------------------------------------------------->JMFF016E10                                 <-----------------------------------------------------------------------------rJMFF016E10  
 121      --------------------------------------------------------------------------------------->JMSF026D02                             <-----------------------------------------------------------------------rJMSF026D02  
 149      ------------------------------------->JMSF001A21                                                                                  <------------------------------------------------------------------rJMSF001A21  
 180 ------------------------------------>JMSF011C08                                                                     <------------------------------------------------------------------------------rJMSF011C08  
 185      --------------------------------------------------------------------------------------->JMFF010L04              <--------------------------------------------------------------------------------rJMFF010L04  
 235                                  ---------------------------------------------------->JMFF017B05                                      <------------------------------------------------------------------------------rJMFF017B05  
 281      ---------------------------------------------------------------------------------------------->JMSF040O20   <--------------------------------------------------------------------------rJMSF040O20  
              ---------------------------------------------------------------------------------------->JMSF029N06#