| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF020C20 | Sequence | 574 | 002451 (9) | emb|CDP02088.1| | 1e-80 | unnamed protein product [Coffea canephora] | 767 | 004159 (8) | ref|XP_007031533.1| | 9e-102 | Isocitrate/isopropylmalate dehydrogenase family protein isoform 1 [Theobroma ca |
| JMFF022H15 | Sequence | 506 | 002451 (9) | emb|CDP02088.1| | 7e-64 | unnamed protein product [Coffea canephora] | 760 | 004159 (8) | ref|XP_007031533.1| | 3e-101 | Isocitrate/isopropylmalate dehydrogenase family protein isoform 1 [Theobroma ca |
| JMFF027N08 | Sequence | 571 | 002451 (9) | emb|CDP02088.1| | 2e-80 | unnamed protein product [Coffea canephora] | 635 | 004159 (8) | ref|XP_011097423.1| | 1e-64 | PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform |
| JMFF046C12 | Sequence | 511 | 002451 (9) | emb|CDP02088.1| | 1e-72 | unnamed protein product [Coffea canephora] | |||||
| JMFF049P20 | Sequence | 628 | 002451 (9) | emb|CDP02088.1| | 3e-80 | unnamed protein product [Coffea canephora] | 579 | 004159 (8) | ref|XP_011097423.1| | 2e-45 | PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform |
| JMSF010P12 | Sequence | 220 | 002451 (9) | 760 | 004159 (8) | ref|XP_007031533.1| | 2e-104 | Isocitrate/isopropylmalate dehydrogenase family protein isoform 1 [Theobroma ca | |||
| JMSF036A20 | Sequence | 669 | 002451 (9) | emb|CDP02088.1| | 6e-106 | unnamed protein product [Coffea canephora] | 669 | 004159 (8) | ref|XP_011097423.1| | 3e-80 | PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform |
| JMSF044L16 | Sequence | 823 | 002451 (9) | ref|XP_009768205.1| | 6e-141 | PREDICTED: isocitrate dehydrogenase [NADP] [Nicotiana sylvestris] | 783 | 004159 (8) | ref|XP_007031533.1| | 2e-106 | Isocitrate/isopropylmalate dehydrogenase family protein isoform 1 [Theobroma ca |
| JMSF048F16 | Sequence | 675 | 002451 (9) | emb|CDP02088.1| | 1e-96 | unnamed protein product [Coffea canephora] | 831 | 004159 (8) | ref|XP_011097423.1| | 1e-111 | PREDICTED: isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig002451============================================ 823 ============================================Contig004159============================================ 885 3 --------------------------------------------------------------------------->JMFF049P20 <----------------------------------------------------------------rJMFF049P20 25 -------------------------------------------------------------------->JMFF027N08 <-----------------------------------------------------------------------rJMFF027N08 38 ------------------------------------------------------------>JMFF022H15 <-------------------------------------------------------------------------------------rJMFF022H15 38 --------------------------------------------------------------------->JMFF020C20 <--------------------------------------------------------------------------------------rJMFF020C20 48 --------------------------------------------------------------------------------------------------->JMSF044L16 <--------------------------------------------------------------------------------------rJMSF044L16 55 -------------------------------------------------------------------------------->JMSF036A20 <---------------------------------------------------------------------------rJMSF036A20 56 -------------------------------------------------------------------------------->JMSF048F16 <---------------------------------------------------------------------------------------------rJMSF048F16 58 ------------------------->JMSF010P12 <-------------------------------------------------------------------------------------rJMSF010P12 ------------------------------------------------------------->JMFF046C12-