| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF006A06 | Sequence | 591 | 012481 (35) | gb|ABF94275.1| | 5e-120 | Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group] | 766 | 008993 (14) | gb|AAR83865.1| | 9e-100 | elongation factor 1-alpha [Capsicum annuum] |
| JMFF006C24 | Sequence | 575 | 012481 (35) | gb|EMT09703.1| | 8e-87 | Elongation factor 1-alpha [Aegilops tauschii] | 750 | 008993 (14) | gb|AAR83865.1| | 5e-95 | elongation factor 1-alpha [Capsicum annuum] |
| JMFF016H10 | Sequence | 591 | 012481 (35) | gb|ABF94275.1| | 2e-119 | Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group] | 734 | 008993 (14) | gb|AAR83865.1| | 4e-93 | elongation factor 1-alpha [Capsicum annuum] |
| JMFF026C08 | Sequence | 597 | 012481 (35) | gb|ABF94275.1| | 8e-126 | Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group] | 740 | 008993 (14) | gb|AAF79822.1|AC026875_2 | 2e-65 | T6D22.2 [Arabidopsis thaliana] |
| JMFF027P11 | Sequence | 508 | 012481 (35) | gb|EAY88762.1| | 7e-98 | hypothetical protein OsI_10238 [Oryza sativa Indica Group] | 698 | 008993 (14) | gb|AAT72900.1| | 6e-67 | elongation factor 1A SMV resistance-related protein [Glycine max] |
| JMFF030F17 | Sequence | 567 | 012481 (35) | gb|AFW87115.1| | 8e-114 | putative translation elongation factor Tu family protein isoform 1 [Zea mays] g | 705 | 008993 (14) | gb|AAR83865.1| | 4e-100 | elongation factor 1-alpha [Capsicum annuum] |
| JMFF035A02 | Sequence | 573 | 012481 (35) | gb|ACG70967.1| | 3e-115 | translation elongation factor 1, partial [Ziziphus jujuba] | 741 | 008993 (14) | gb|AAR83865.1| | 3e-93 | elongation factor 1-alpha [Capsicum annuum] |
| JMFF036F08 | Sequence | 639 | 012481 (35) | gb|ABF94275.1| | 2e-138 | Elongation factor 1-alpha, putative, expressed [Oryza sativa Japonica Group] | 685 | 008993 (14) | ref|XP_009773066.1| | 8e-84 | PREDICTED: elongation factor 1-alpha, partial [Nicotiana sylvestris] |
| JMFF037G17 | Sequence | 576 | 012481 (35) | gb|AFW87115.1| | 8e-114 | putative translation elongation factor Tu family protein isoform 1 [Zea mays] g | 763 | 008993 (14) | gb|AAR83865.1| | 4e-97 | elongation factor 1-alpha [Capsicum annuum] |
| JMSF009I07 | Sequence | 319 | 012481 (35) | dbj|BAJ91931.1| | 2e-48 | predicted protein [Hordeum vulgare subsp. vulgare] | 752 | 008993 (14) | gb|AAR83865.1| | 4e-97 | elongation factor 1-alpha [Capsicum annuum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig012481============================================1735 ============================================Contig008993============================================1467 698 ---------------------------->JMFF027P11 <-----------------------------------------------rJMFF027P11 698 -------------------------------->JMFF006C24 <--------------------------------------------------rJMFF006C24 700 -------------------------------->JMFF035A02 <--------------------------------------------------rJMFF035A02 701 --------------------------------->JMFF006A06 <---------------------------------------------------rJMFF006A06 702 -------------------------------->JMFF037G17 <--------------------------------------------------rJMFF037G17 711 --------------------------------->JMFF016H10 <-------------------------------------------------rJMFF016H10 712 ----------------->JMSF009I07 <--------------------------------------------------rJMSF009I07 762 -------------------------------->JMFF030F17 <-----------------------------------------------rJMFF030F17 763 ------------------------------->JMFF026C08 <-------------------------------------------------rJMFF026C08 775 ---------------------------------->JMFF036F08 <----------------------------------------------rJMFF036F08 <-------------------------------------rJMFF023K11* <----------------------------------------rJMFF036F19* ----------------------------------->JMFS049G01- --------------------------------->JMFN013D19- <------------------------------------------rJMSF037E05* ------>JMFN013D21- <--------------------------------------------rJMSF021A20* <-----------------------------------------rJMFF004G06* ---------------------------------->JMFS046C12- --------------->JMFN019B22- <----------------------------------------rJMSF049K21* <-------------------------------rJMFF050G15* <------------------------------------rJMFF013P19* <----------rJMFF008B09* <-------------------------------------rJMFF018A13* <---------------------------------------rJMFF007H13* <--------------------------------------------rJMFF025C06* <------------------------------------rJMFF015E13* --------------------------------->JMFN032E11- <-----------------------------------------rJMFF008O20* <------------------------------------rJMFF034B15* -------------------------------->JMFS135E08- <--------------------------------------------rJMFF007O02* <------------------------------------------rJMFF038N03* <-------------------------------------rJMFF001P21* ------------------------------------------>JMFN013C03- ------------------------------------>rJMFF041E12* --------------------------------------->JMFS012A05- --------------------------------------->JMFF034J16#