| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF015L19 | Sequence | 585 | 000846 (14) | ref|XP_009798338.1| | 3e-34 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 622 | 013673 (12) | ref|XP_006468698.1| | 3e-26 | PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Citrus sinensis] gb|KDO76 |
| JMSF001H24 | Sequence | 283 | 000846 (14) | 752 | 013673 (12) | ref|XP_007044348.1| | 2e-45 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E | |||
| JMSF003I08 | Sequence | 327 | 000846 (14) | ref|XP_009798338.1| | 1e-07 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 787 | 013673 (12) | ref|XP_007044348.1| | 2e-45 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF012A02 | Sequence | 477 | 000846 (14) | ref|XP_009798338.1| | 1e-27 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 661 | 013673 (12) | ref|XP_007044348.1| | 2e-40 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF014E09 | Sequence | 267 | 000846 (14) | 720 | 013673 (12) | ref|XP_007044348.1| | 2e-43 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E | |||
| JMSF022F24 | Sequence | 638 | 000846 (14) | ref|XP_009798338.1| | 1e-37 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 747 | 013673 (12) | ref|XP_007044348.1| | 8e-45 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF027O04 | Sequence | 637 | 000846 (14) | ref|XP_009798338.1| | 2e-37 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 686 | 013673 (12) | ref|XP_007044348.1| | 1e-45 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF028P14 | Sequence | 623 | 000846 (14) | ref|XP_009798338.1| | 8e-36 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 710 | 013673 (12) | ref|XP_009603861.1| | 3e-55 | PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Nicotiana tomentosiformis |
| JMSF033E24 | Sequence | 687 | 000846 (14) | ref|XP_007036519.1| | 3e-41 | Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa | 746 | 013673 (12) | ref|XP_007044348.1| | 3e-44 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF033N13 | Sequence | 639 | 000846 (14) | ref|XP_009798338.1| | 7e-37 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | 652 | 013673 (12) | ref|XP_006468698.1| | 2e-20 | PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Citrus sinensis] gb|KDO76 |
| JMSF035K10 | Sequence | 638 | 000846 (14) | ref|XP_009798338.1| | 7e-37 | PREDICTED: zinc finger protein CONSTANS-LIKE 6-like [Nicotiana sylvestris] | |||||
| JMSF042C10 | Sequence | 750 | 000846 (14) | ref|XP_007036519.1| | 6e-41 | Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa | 795 | 013673 (12) | ref|XP_007044348.1| | 3e-45 | B-box type zinc finger protein with CCT domain, putative [Theobroma cacao] gb|E |
| JMSF052D13 | Sequence | 697 | 000846 (14) | ref|XP_007036519.1| | 5e-42 | Transcription factor, putative [Theobroma cacao] gb|EOY21020.1| Transcription fa | 940 | 013673 (12) | ref|XP_009603861.1| | 6e-52 | PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Nicotiana tomentosiformis |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig000846============================================ 752 ============================================Contig013673============================================ 965 4 --------------------------------------------------------------------------->JMFF015L19 <---------------------------------------------------------------rJMFF015L19 29 -------------------------------------------------------------------------------------------->JMSF052D13 <------------------------------------------------------------------------------------------------rJMSF052D13 30 ----------------------------------->JMSF014E09 <--------------------------------------------------------------------------rJMSF014E09 31 ------------------------------------------------------------------------------------>JMSF033N13 <---------------------------------------------------------rJMSF033N13 31 --------------------------------------------------------------------------------------------------->JMSF042C10 <---------------------------------------------------------------------------------rJMSF042C10 32 ------------------------------------------->JMSF003I08 <---------------------------------------------------------------------------------rJMSF003I08 34 -------------------------------------------------------------->JMSF012A02 <-------------------------------------------------------------------rJMSF012A02 87 ------------------------------------->JMSF001H24 <----------------------------------------------------------------------------rJMSF001H24 87 ------------------------------------------------------------------------------------>JMSF027O04 <----------------------------------------------------------------------rJMSF027O04 87 ------------------------------------------------------------------------------------------>JMSF033E24 <-----------------------------------------------------------------------------rJMSF033E24 88 ------------------------------------------------------------------------------------>JMSF022F24 <----------------------------------------------------------------------------rJMSF022F24 258 ---------------------------------------------------------------------------------->JMSF028P14 <-------------------------------------------------------------------------rJMSF028P14 ------------------------------------------------------------------------------------>JMSF035K10- ------------------------------------------>JMSF019B06*