| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF006G24 | Sequence | 607 | 005940 (18) | ref|XP_010446199.1| | 2e-119 | PREDICTED: actin-85C [Camelina sativa] | 689 | 004110 (14) | gb|AFD62266.1| | 2e-87 | actin, partial [Persea americana] |
| JMFF011L21 | Sequence | 491 | 005940 (18) | gb|AET50987.1| | 2e-98 | actin [Lactuca sativa] | 684 | 004110 (14) | gb|AFD62266.1| | 1e-88 | actin, partial [Persea americana] |
| JMFF014B07 | Sequence | 456 | 005940 (18) | ref|XP_010485236.1| | 1e-81 | PREDICTED: actin-4-like [Camelina sativa] | 470 | 004110 (14) | dbj|BAB60900.1| | 1e-35 | actin [Ipomoea nil] |
| JMFF015P07 | Sequence | 571 | 005940 (18) | ref|XP_010485236.1| | 4e-112 | PREDICTED: actin-4-like [Camelina sativa] | 527 | 004110 (14) | dbj|BAB60900.1| | 4e-50 | actin [Ipomoea nil] |
| JMFF016B24 | Sequence | 502 | 005940 (18) | ref|XP_010485236.1| | 5e-92 | PREDICTED: actin-4-like [Camelina sativa] | 207 | 004110 (14) | dbj|BAB60900.1| | 5e-33 | actin [Ipomoea nil] |
| JMFF016O23 | Sequence | 573 | 005940 (18) | ref|XP_010485236.1| | 3e-110 | PREDICTED: actin-4-like [Camelina sativa] | 750 | 004110 (14) | gb|AFD62266.1| | 5e-100 | actin, partial [Persea americana] |
| JMFF018O22 | Sequence | 539 | 005940 (18) | ref|XP_010485236.1| | 4e-102 | PREDICTED: actin-4-like [Camelina sativa] | 668 | 004110 (14) | gb|AFP43696.1| | 2e-95 | actin4, partial [Eriobotrya japonica] |
| JMFF025G13 | Sequence | 556 | 005940 (18) | ref|XP_010485236.1| | 5e-107 | PREDICTED: actin-4-like [Camelina sativa] | 677 | 004110 (14) | gb|AFD62266.1| | 1e-87 | actin, partial [Persea americana] |
| JMFF031J24 | Sequence | 575 | 005940 (18) | ref|XP_010485236.1| | 7e-113 | PREDICTED: actin-4-like [Camelina sativa] | 181 | 004110 (14) | |||
| JMFF043M04 | Sequence | 652 | 005940 (18) | ref|XP_010446199.1| | 1e-129 | PREDICTED: actin-85C [Camelina sativa] | 543 | 004110 (14) | dbj|BAB60900.1| | 6e-49 | actin [Ipomoea nil] |
| JMSF004A06 | Sequence | 245 | 005940 (18) | emb|CDX67573.1| | 1e-26 | BnaA07g16130D [Brassica napus] | |||||
| JMSF013K18 | Sequence | 529 | 005940 (18) | ref|XP_010485236.1| | 7e-99 | PREDICTED: actin-4-like [Camelina sativa] | 645 | 004110 (14) | gb|AFD62266.1| | 3e-85 | actin, partial [Persea americana] |
| JMSF016A13 | Sequence | 486 | 005940 (18) | ref|XP_010485236.1| | 9e-90 | PREDICTED: actin-4-like [Camelina sativa] | 716 | 004110 (14) | gb|AFP43696.1| | 6e-91 | actin4, partial [Eriobotrya japonica] |
| JMSF028B11 | Sequence | 276 | 004110 (14) | gb|AFD62266.1| | 3e-27 | actin, partial [Persea americana] | |||||
| JMSF040N06 | Sequence | 681 | 005940 (18) | ref|XP_010446199.1| | 4e-138 | PREDICTED: actin-85C [Camelina sativa] | 744 | 004110 (14) | ref|XP_011091473.1| | 1e-82 | PREDICTED: actin-11 [Sesamum indicum] ref|XP_011091474.1| PREDICTED: actin-11 [S |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005940============================================ 736 ============================================Contig004110============================================ 813 4 --------------------------------------------------------------------------------------->JMFF043M04 <------------------------------------------------------------------rJMFF043M04 6 ----------------------------------------------------------------------------->JMFF016O23 <-------------------------------------------------------------------------------------------rJMFF016O23 31 -------------------------------------------------------------------------->JMFF025G13 <----------------------------------------------------------------------------------rJMFF025G13 31 --------------------------------------------------------------------------------->JMFF006G24 <------------------------------------------------------------------------------------rJMFF006G24 32 ------------------------------------------------------------->JMFF014B07 <---------------------------------------------------------rJMFF014B07 35 ----------------------------------------------------------------------------->JMFF015P07 <----------------------------------------------------------------rJMFF015P07 39 ----------------------------------------------------------------------------->JMFF031J24 <---------------------rJMFF031J24 44 ----------------------------------------------------------------->JMSF016A13 <---------------------------------------------------------------------------------------rJMSF016A13 60 ----------------------------------------------------------------------->JMSF013K18 <-------------------------------------------------------------------------------rJMSF013K18 70 ------------------------------------------------------------------------------------------->JMSF040N06 <-------------------------------------------------------------------------------------------rJMSF040N06 79 ------------------------------------------------------------------------>JMFF018O22 <---------------------------------------------------------------------------------rJMFF018O22 273 ------------------------------------------------------------------>JMFF011L21 <-----------------------------------------------------------------------------------rJMFF011L21 305 ------------------------------------------------------------------->JMFF016B24 <------------------------rJMFF016B24 -------------------------------------------------------------------------->JMFF042I17* --------------------------------->JMSF010B15* -------------------------------------------------------------------------->JMFF013E07* -------------------------------->JMSF004A06- -------------------------------------------------------------------------------------------->JMSF032H11* <--------------------------------rJMSF028B11-