Contig 007005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005D07Sequence126007005 (3)
JMFF051E22Sequence524012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]553007005 (3)ref|XP_004299880.1|4e-26PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Fragaria
JMSF023I07Sequence689012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]737007005 (3)ref|XP_009781014.1|402PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF023I07+                                               GGTCGAGTATATGTTGGATGTGG
                      ____________________________________________________________
consensus                                                  GGTCGAGTATATGTTGGATGTGG
 
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rJMSF023I07+          ANTACCATTTGTTTAGCCTTAGGAGAAGCAAGGCGAACTTCAATCGCATTCTCTCGCTTT
                      ____________________________________________________________
consensus             ANTACCATTTGTTTAGCCTTAGGAGAAGCAAGGCGAACTTCAATCGCATTCTCTCGCTTT
 
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rJMSF023I07+          TCTCCGGGGTTAGTGCCGTCTGCCGGTGGTACTATGGAATCTGCTACTGGAAAAACCCGT
                      ____________________________________________________________
consensus             TCTCCGGGGTTAGTGCCGTCTGCCGGTGGTACTATGGAATCTGCTACTGGAAAAACCCGT
 
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rJMSF023I07+          TCACGACCATCCTTGTGCACGTGCTTTTCTTGATCCTCGTTTGCTACCCGGAGCTCATCC
                      ____________________________________________________________
consensus             TCACGACCATCCTTGTGCACGTGCTTTTCTTGATCCTCGTTTGCTACCCGGAGCTCATCC
 
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rJMSF023I07+          TCCCCACGGTTTTCCTATACCTCTTCGTGATTGGCCTGTGGAACTACCGGTTCAGGCCTA
                      ____________________________________________________________
consensus             TCCCCACGGTTTTCCTATACCTCTTCGTGATTGGCCTGTGGAACTACCGGTTCAGGCCTA
 
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rJMSF023I07+          GGAACCCACCCGCCATGGACGCACGCCTTTCTCTGGCGGATAGTGTCCATCCCGACGAAC
                      ____________________________________________________________
consensus             GGAACCCACCCGCCATGGACGCACGCCTTTCTCTGGCGGATAGTGTCCATCCCGACGAAC
 
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rJMSF023I07+          TGGACGAGGAATTCGACTCGTTCCCGTCGAGTAGGCCTAACGAGATTGTGAGATTGAGGT
                      ____________________________________________________________
consensus             TGGACGAGGAATTCGACTCGTTCCCGTCGAGTAGGCCTAACGAGATTGTGAGATTGAGGT
 
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rJMSF023I07+          ATGACAGGCTGAGGTCTGTGGCGGGGAGGGTGCAGAGCGTTTTGGGGGACTTGGCAACGC
                      ____________________________________________________________
consensus             ATGACAGGCTGAGGTCTGTGGCGGGGAGGGTGCAGAGCGTTTTGGGGGACTTGGCAACGC
 
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rJMSF023I07+          AAGGGGAACGAGCTCTCGCCATTTTAAGCTGGAGGGATCCCCGGGCTACAGCCATATTCA
rJMFF051E22+                                                         ACAGCCATATTCA
                      ____________________________________________________________
consensus             AAGGGGAACGAGCTCTCGCCATTTTAAGCTGGAGGGATCCCCGGGCTACAGCCATATTCA
 
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rJMSF023I07+          TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
rJMFF051E22+          TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
                      ____________________________________________________________
consensus             TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
 
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rJMSF023I07+          TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
rJMFF051E22+          TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
                      ____________________________________________________________
consensus             TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
 
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rJMSF023I07+          CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
rJMFF051E22+          CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
                      ____________________________________________________________
consensus             CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
 
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rJMSF023I07+          TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATG      
rJMFF051E22+          TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATGTATGTA
                      ____________________________________________________________
consensus             TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATGTATGTA
 
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rJMFF051E22+          TGGTTGAGTAAATAAATGGAAGGAATAAACTTGGCAGAAGAAGAAGAGACATAGCAGTGA
                      ____________________________________________________________
consensus             TGGTTGAGTAAATAAATGGAAGGAATAAACTTGGCAGAAGAAGAAGAGACATAGCAGTGA
 
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rJMFF051E22+          AAGTGAGTTCCCTTTCTTTTGTCTCCCCCAGAATCAGAATCAGAATGTACTTCTTGTGTA
                      ____________________________________________________________
consensus             AAGTGAGTTCCCTTTCTTTTGTCTCCCCCAGAATCAGAATCAGAATGTACTTCTTGTGTA
 
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JMCP005D07-                              GAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
rJMFF051E22+          GTGTTCATATGCAGCAGGGGAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
                      ____________________________________________________________
consensus             GTGTTCATATGCAGCAGGGGAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
 
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JMCP005D07-           CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
rJMFF051E22+          CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
                      ____________________________________________________________
consensus             CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
 
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JMCP005D07-           TAAATTCATATAACCTCTCTTATT                                    
rJMFF051E22+          TAAATTCATATAACCTCTCTTATTTCTTAAAAGAAAAAAAAAAAAAAACTCTCCAGGTGA
                      ____________________________________________________________
consensus             TAAATTCATATAACCTCTCTTATTTCTTAAAAGAAAAAAAAAAAAAAACTCTCCAGGTGA