Contig 007005:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005D07Sequence126007005 (3)
JMFF051E22Sequence524012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]553007005 (3)ref|XP_004299880.1|4e-26PREDICTED: multiple C2 and transmembrane domain-containing protein 2 [Fragaria
JMSF023I07Sequence689012011 (6)ref|XP_009781014.1|207PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]737007005 (3)ref|XP_009781014.1|402PREDICTED: uncharacterized protein LOC104229981 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF023I07+ GGTCGAGTATATGTTGGATGTGG
                      ____________________________________________________________
consensus GGTCGAGTATATGTTGGATGTGG
 
. : . : . : . : . : . :
rJMSF023I07+ ANTACCATTTGTTTAGCCTTAGGAGAAGCAAGGCGAACTTCAATCGCATTCTCTCGCTTT
                      ____________________________________________________________
consensus ANTACCATTTGTTTAGCCTTAGGAGAAGCAAGGCGAACTTCAATCGCATTCTCTCGCTTT
 
. : . : . : . : . : . :
rJMSF023I07+ TCTCCGGGGTTAGTGCCGTCTGCCGGTGGTACTATGGAATCTGCTACTGGAAAAACCCGT
                      ____________________________________________________________
consensus TCTCCGGGGTTAGTGCCGTCTGCCGGTGGTACTATGGAATCTGCTACTGGAAAAACCCGT
 
. : . : . : . : . : . :
rJMSF023I07+ TCACGACCATCCTTGTGCACGTGCTTTTCTTGATCCTCGTTTGCTACCCGGAGCTCATCC
                      ____________________________________________________________
consensus TCACGACCATCCTTGTGCACGTGCTTTTCTTGATCCTCGTTTGCTACCCGGAGCTCATCC
 
. : . : . : . : . : . :
rJMSF023I07+ TCCCCACGGTTTTCCTATACCTCTTCGTGATTGGCCTGTGGAACTACCGGTTCAGGCCTA
                      ____________________________________________________________
consensus TCCCCACGGTTTTCCTATACCTCTTCGTGATTGGCCTGTGGAACTACCGGTTCAGGCCTA
 
. : . : . : . : . : . :
rJMSF023I07+ GGAACCCACCCGCCATGGACGCACGCCTTTCTCTGGCGGATAGTGTCCATCCCGACGAAC
                      ____________________________________________________________
consensus GGAACCCACCCGCCATGGACGCACGCCTTTCTCTGGCGGATAGTGTCCATCCCGACGAAC
 
. : . : . : . : . : . :
rJMSF023I07+ TGGACGAGGAATTCGACTCGTTCCCGTCGAGTAGGCCTAACGAGATTGTGAGATTGAGGT
                      ____________________________________________________________
consensus TGGACGAGGAATTCGACTCGTTCCCGTCGAGTAGGCCTAACGAGATTGTGAGATTGAGGT
 
. : . : . : . : . : . :
rJMSF023I07+ ATGACAGGCTGAGGTCTGTGGCGGGGAGGGTGCAGAGCGTTTTGGGGGACTTGGCAACGC
                      ____________________________________________________________
consensus ATGACAGGCTGAGGTCTGTGGCGGGGAGGGTGCAGAGCGTTTTGGGGGACTTGGCAACGC
 
. : . : . : . : . : . :
rJMSF023I07+ AAGGGGAACGAGCTCTCGCCATTTTAAGCTGGAGGGATCCCCGGGCTACAGCCATATTCA
rJMFF051E22+ ACAGCCATATTCA
                      ____________________________________________________________
consensus AAGGGGAACGAGCTCTCGCCATTTTAAGCTGGAGGGATCCCCGGGCTACAGCCATATTCA
 
. : . : . : . : . : . :
rJMSF023I07+ TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
rJMFF051E22+ TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
                      ____________________________________________________________
consensus TCATCTTTGCTTTGATCTGGGCTGTGTTTCTTTATGTTACGCCTTTCCAAGTGATAGCGG
 
. : . : . : . : . : . :
rJMSF023I07+ TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
rJMFF051E22+ TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
                      ____________________________________________________________
consensus TTCTCGTGGGGCTGTTCATGCTGCGCCATCCCCGGTTCAGGGGCAAGCTGCCATCGGTGC
 
. : . : . : . : . : . :
rJMSF023I07+ CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
rJMFF051E22+ CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
                      ____________________________________________________________
consensus CCGTTAACTTCTTCAAGAGACTGCCAGCGAAATCAGACATGCTTTTGTGAGATTTTAAGG
 
. : . : . : . : . : . :
rJMSF023I07+ TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATG
rJMFF051E22+ TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATGTATGTA
                      ____________________________________________________________
consensus TTGTAATTATCAATCAATTTTTCTGGTTCAGTTCAAGTGTAACATATATGTATGTATGTA
 
. : . : . : . : . : . :
rJMFF051E22+ TGGTTGAGTAAATAAATGGAAGGAATAAACTTGGCAGAAGAAGAAGAGACATAGCAGTGA
                      ____________________________________________________________
consensus TGGTTGAGTAAATAAATGGAAGGAATAAACTTGGCAGAAGAAGAAGAGACATAGCAGTGA
 
. : . : . : . : . : . :
rJMFF051E22+ AAGTGAGTTCCCTTTCTTTTGTCTCCCCCAGAATCAGAATCAGAATGTACTTCTTGTGTA
                      ____________________________________________________________
consensus AAGTGAGTTCCCTTTCTTTTGTCTCCCCCAGAATCAGAATCAGAATGTACTTCTTGTGTA
 
. : . : . : . : . : . :
JMCP005D07- GAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
rJMFF051E22+ GTGTTCATATGCAGCAGGGGAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
                      ____________________________________________________________
consensus GTGTTCATATGCAGCAGGGGAGGGGATGGGATTACAATTATATTCCTTTTGTTTCCTATT
 
. : . : . : . : . : . :
JMCP005D07- CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
rJMFF051E22+ CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
                      ____________________________________________________________
consensus CCATTGTAGATTAGATGATATTCAATATTGTATTGATTATTGGATTATGAGGCCATCAAA
 
. : . : . : . : . : . :
JMCP005D07- TAAATTCATATAACCTCTCTTATT
rJMFF051E22+ TAAATTCATATAACCTCTCTTATTTCTTAAAAGAAAAAAAAAAAAAAACTCTCCAGGTGA
                      ____________________________________________________________
consensus TAAATTCATATAACCTCTCTTATTTCTTAAAAGAAAAAAAAAAAAAAACTCTCCAGGTGA