List of clones in pair P000230.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P06Sequence484003164 (11)gb|ACF17656.1|5e-68putative glutamine synthase 2 [Capsicum annuum]717002584 (9)ref|XP_004167630.1|1e-80PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like, partial [Cucu
JMFF010I10Sequence598003164 (11)gb|ACF17656.1|1e-92putative glutamine synthase 2 [Capsicum annuum]735002584 (9)ref|XP_011071523.1|4e-112PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like [Sesamum indic
JMFF022F17Sequence589003164 (11)gb|ACF17656.1|2e-88putative glutamine synthase 2 [Capsicum annuum]773002584 (9)ref|XP_011071523.1|5e-113PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like [Sesamum indic
JMFF035E19Sequence599003164 (11)gb|ACF17656.1|1e-92putative glutamine synthase 2 [Capsicum annuum]756002584 (9)ref|XP_011071523.1|2e-125PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like [Sesamum indic
JMFF048K15Sequence482003164 (11)gb|ACF17656.1|5e-62putative glutamine synthase 2 [Capsicum annuum]522002584 (9)ref|XP_004167630.1|8e-53PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like, partial [Cucu
JMFF051K07Sequence595003164 (11)gb|ACF17656.1|7e-84putative glutamine synthase 2 [Capsicum annuum]630002584 (9)ref|XP_004167630.1|5e-72PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like, partial [Cucu
JMFN042F04Sequence186002584 (9)ref|XP_010450398.1|1e-30PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMSF018O14Sequence497003164 (11)gb|ACF17656.1|1e-64putative glutamine synthase 2 [Capsicum annuum]741002584 (9)ref|XP_011071523.1|4e-98PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like [Sesamum indic
JMSF028E22Sequence647003164 (11)gb|ACF17656.1|3e-86putative glutamine synthase 2 [Capsicum annuum]673002584 (9)ref|XP_011071523.1|3e-100PREDICTED: glutamine synthetase leaf isozyme, chloroplastic-like [Sesamum indic
JMSF044I13Sequence798003164 (11)gb|ACF17656.1|7e-128putative glutamine synthase 2 [Capsicum annuum]

Contig 3164 BLAST Hits against nr-aa DB Show

Contig 2584 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003164============================================ 801         ============================================Contig002584============================================ 814
   2 ------------------------------------------------------------------------->JMFF022F17                                  <----------------------------------------------------------------------------------------------rJMFF022F17  
  21 ----------------------------------------------------------->JMFF048K15                                                                             <---------------------------------------------------------------rJMFF048K15  
  44  -------------------------------------------------------------------------->JMFF010I10                                <-----------------------------------------------------------------------------------------rJMFF010I10  
  56  ------------------------------------------------------------------------------->JMSF028E22                                 <----------------------------------------------------------------------------------rJMSF028E22  
  64  -------------------------------------------------------------------------->JMFF035E19                           <--------------------------------------------------------------------------------------------rJMFF035E19  
 192 ------------------------------------------------------------------------->JMFF051K07                                                       <--------------------------------------------------rJMFF051K07  
 196  ------------------------------------------------------------>JMSF018O14                                                     <----------------------------------------------------------------rJMSF018O14  
 215    ----------------------------------------------------------->JMFF005P06                                                           <---------------------------------------------------------rJMFF005P06  
     ------------------------>JMSF006B12*                                                                             
     --------------------------------------------------------------------------------------------------->JMSF044I13-  
       ---------------------------------------------------------------------------->JMFF032L10*                       
                                                                                                                                                 ---------------------->JMFN042F04-