List of clones in pair P000221.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004M17Sequence689009693 (11)gb|AAF14242.1|AF110226_12e-13nuclear RNA binding protein [Nicotiana tabacum]
JMFF011E23Sequence551010722 (9)794009693 (11)gb|AAF14242.1|AF110226_16e-33nuclear RNA binding protein [Nicotiana tabacum]
JMFF013J11Sequence516010722 (9)794009693 (11)gb|AAF14242.1|AF110226_15e-33nuclear RNA binding protein [Nicotiana tabacum]
JMFF021G07Sequence489010722 (9)699009693 (11)gb|AAF14242.1|AF110226_11e-15nuclear RNA binding protein [Nicotiana tabacum]
JMFF026O15Sequence618009693 (11)ref|XP_006362472.1|4e-36PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum
JMFF028B10Sequence515010722 (9)756009693 (11)ref|XP_009613636.1|3e-29PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform X2 [Nicotiana
JMFN007B14Sequence551009693 (11)ref|XP_007218155.1|9e-05hypothetical protein PRUPE_ppa007410mg [Prunus persica] gb|EMJ19354.1| hypotheti
JMFS116A01Sequence546010722 (9)
JMSF009N13Sequence330010722 (9)765009693 (11)gb|AAF14242.1|AF110226_11e-33nuclear RNA binding protein [Nicotiana tabacum]
JMSF012I23Sequence358010722 (9)774009693 (11)gb|AAF14242.1|AF110226_17e-27nuclear RNA binding protein [Nicotiana tabacum]
JMSF025G12Sequence575010722 (9)799009693 (11)ref|XP_006362472.1|3e-38PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum
JMSF040B11Sequence643010722 (9)850009693 (11)gb|AAF14242.1|AF110226_13e-30nuclear RNA binding protein [Nicotiana tabacum]

Contig 10722 BLAST Hits against nr-aa DB Show

Contig 9693 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010722============================================ 672         ============================================Contig009693============================================ 942
   3 ------------------------------------------------------------------------>JMFF021G07                                                        <-------------------------------------------------------------------------rJMFF021G07  
  22 ----------------------------------------------------------------------------------------------->JMSF040B11               <-----------------------------------------------------------------------------------------rJMSF040B11  
  72  ---------------------------------------------------->JMSF012I23                                                            <---------------------------------------------------------------------------------rJMSF012I23  
 114 --------------------------------------------------------------------------------->JMFF011E23                        <------------------------------------------------------------------------------------rJMFF011E23  
 115 ---------------------------------------------------------------------------->JMFF013J11                             <------------------------------------------------------------------------------------rJMFF013J11  
 132 ---------------------------------------------------------------------------->JMFF028B10                                  <-----------------------------------------------------------------------------rJMFF028B10  
 143 ------------------------------------------------------------------------------------->JMSF025G12                 <------------------------------------------------------------------------------------rJMSF025G12  
 146  ------------------------------------------------>JMSF009N13                                                         <--------------------------------------------------------------------------------rJMSF009N13  
                        -------------------------------------------------------------------------------->JMFS116A01-  
                                                                                                                                     <------------------------------------------------------------------------rJMFF004M17- 
                                                                                                                                                         --------------------------------------------------------->JMFN007B14-  
                                                                                                                      <-----------------------------------------------------------------rJMFF026O15-