List of clones in pair P000174.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E11Sequence559000893 (9)gb|KJB20721.1|5e-39hypothetical protein B456_003G161000 [Gossypium raimondii]752004712 (11)ref|XP_010278591.1|2e-55PREDICTED: E3 ubiquitin-protein ligase At1g12760 isoform X4 [Nelumbo nucifera]
JMFF008C21Sequence564000893 (9)gb|KJB20721.1|5e-35hypothetical protein B456_003G161000 [Gossypium raimondii]724004712 (11)ref|XP_010278589.1|8e-73PREDICTED: E3 ubiquitin-protein ligase At1g12760 isoform X2 [Nelumbo nucifera]
JMFF012I23Sequence536000893 (9)gb|KJB20721.1|3e-37hypothetical protein B456_003G161000 [Gossypium raimondii]732004712 (11)ref|XP_009801536.1|6e-52PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Nicotiana sylvestris]
JMFF012M22Sequence462000893 (9)gb|KJB20721.1|5e-21hypothetical protein B456_003G161000 [Gossypium raimondii]574004712 (11)ref|XP_011463819.1|3e-38PREDICTED: E3 ubiquitin-protein ligase At1g63170 isoform X2 [Fragaria vesca sub
JMFF013G20Sequence531000893 (9)gb|KHG00577.1|1e-30hypothetical protein F383_17805 [Gossypium arboreum] gb|KHG12148.1| hypothetical799004712 (11)ref|XP_010278591.1|1e-67PREDICTED: E3 ubiquitin-protein ligase At1g12760 isoform X4 [Nelumbo nucifera]
JMFF023A24Sequence369000893 (9)740004712 (11)ref|XP_010278591.1|4e-52PREDICTED: E3 ubiquitin-protein ligase At1g12760 isoform X4 [Nelumbo nucifera]
JMFF040C18Sequence537000893 (9)gb|KJB20721.1|3e-37hypothetical protein B456_003G161000 [Gossypium raimondii]734004712 (11)ref|XP_009801536.1|4e-54PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Nicotiana sylvestris]
JMFF050P15Sequence610000893 (9)gb|KJB20721.1|2e-33hypothetical protein B456_003G161000 [Gossypium raimondii]568004712 (11)gb|KJB39631.1|6e-34hypothetical protein B456_007G022500 [Gossypium raimondii]
JMFN014A14Sequence606004712 (11)gb|KFK43535.1|2e-31hypothetical protein AALP_AA1G139400 [Arabis alpina]
JMSF039C14Sequence624000893 (9)gb|KJB20721.1|7e-40hypothetical protein B456_003G161000 [Gossypium raimondii]844004712 (11)ref|XP_009615319.1|2e-74PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2 [Nicotiana tom

Contig 893 BLAST Hits against nr-aa DB Show

Contig 4712 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000893============================================ 655         ============================================Contig004712============================================ 925
  65  ------------------------------------------------------->JMFF023A24                                                            <-------------------------------------------------------------------------------rJMFF023A24  
  83 ---------------------------------------------------------------------------------------------->JMSF039C14        <------------------------------------------------------------------------------------------rJMSF039C14  
  86        -------------------------------------------------------------------------------------------->JMFF050P15                                    <-------------------------------------------------------------rJMFF050P15  
 102        --------------------------------------------------------------------------------->JMFF012I23                             <------------------------------------------------------------------------------rJMFF012I23  
 103        ---------------------------------------------------------------------->JMFF012M22                                                         <-------------------------------------------------------------rJMFF012M22  
 115        --------------------------------------------------------------------------------->JMFF040C18                           <------------------------------------------------------------------------------rJMFF040C18  
 125           ------------------------------------------------------------------------------------>JMFF007E11                     <--------------------------------------------------------------------------------rJMFF007E11  
 126        -------------------------------------------------------------------------------->JMFF013G20                      <-----------------------------------------------------------------------------------rJMFF013G20  
 166  ------------------------------------------------------------------------------------->JMFF008C21                     <-----------------------------------------------------------------------------rJMFF008C21  

                                                                                                                                                    <--------------------------------------------------rJMFF017L21* 
                                                                                                                                                        <-----------------------------------------------------------------JMFN014A14-