| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004L14 | Sequence | 476 | 006691 (11) | ref|XP_009771287.1| | 3e-15 | PREDICTED: GDT1-like protein 2, chloroplastic isoform X2 [Nicotiana sylvestris] | 717 | 005516 (10) | ref|XP_004247813.1| | 4e-78 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] |
| JMFF005O21 | Sequence | 491 | 006691 (11) | ref|XP_009618080.1| | 4e-29 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 672 | 005516 (10) | ref|XP_002518164.1| | 3e-55 | Transmembrane protein TPARL, putative [Ricinus communis] gb|EEF44297.1| Transmem |
| JMFF020F01 | Sequence | 507 | 006691 (11) | ref|XP_009618080.1| | 1e-29 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 662 | 005516 (10) | ref|XP_010023776.1| | 7e-41 | PREDICTED: GDT1-like protein 2, chloroplastic isoform X1 [Eucalyptus grandis] g |
| JMFF022A17 | Sequence | 571 | 006691 (11) | ref|XP_009618080.1| | 2e-47 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 729 | 005516 (10) | ref|XP_010023776.1| | 1e-45 | PREDICTED: GDT1-like protein 2, chloroplastic isoform X1 [Eucalyptus grandis] g |
| JMFF036H05 | Sequence | 506 | 006691 (11) | ref|XP_009618080.1| | 3e-30 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 732 | 005516 (10) | ref|XP_004247813.1| | 1e-78 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] |
| JMFF044G23 | Sequence | 642 | 006691 (11) | ref|XP_009618080.1| | 7e-61 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 576 | 005516 (10) | ref|XP_002304693.2| | 1e-08 | hypothetical protein POPTR_0003s17320g [Populus trichocarpa] gb|EEE79672.2| hypo |
| JMSF010B17 | Sequence | 257 | 006691 (11) | 736 | 005516 (10) | ref|XP_004247813.1| | 8e-90 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] | |||
| JMSF011L12 | Sequence | 352 | 006691 (11) | ref|XP_009618080.1| | 5e-05 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 702 | 005516 (10) | ref|XP_004247813.1| | 5e-88 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] |
| JMSF024P03 | Sequence | 658 | 006691 (11) | ref|XP_009618080.1| | 5e-72 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | |||||
| JMSF044G22 | Sequence | 768 | 006691 (11) | ref|XP_009618080.1| | 2e-71 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 747 | 005516 (10) | ref|XP_004247813.1| | 9e-88 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] |
| JMSF045L23 | Sequence | 759 | 006691 (11) | ref|XP_009618080.1| | 1e-60 | PREDICTED: GDT1-like protein 2, chloroplastic [Nicotiana tomentosiformis] | 683 | 005516 (10) | ref|XP_004247813.1| | 3e-78 | PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig006691============================================ 827 ============================================Contig005516============================================ 956 81 ---------------------------------------------------------------------------->JMFF044G23 <-----------------------------------------------------------rJMFF044G23 109 -------------------------------------------------------------------->JMFF022A17 <---------------------------------------------------------------------------rJMFF022A17 186 -------------------------------------------------------------------------------------------->JMSF044G22 <-----------------------------------------------------------------------------rJMSF044G22 205 ----------------------------------------------------------->JMFF005O21 <---------------------------------------------------------------------rJMFF005O21 250 ------------------------------------------------------------>JMFF020F01 <-----------------------------------------------------rJMFF020F01 252 --------------------------------------------------------->JMFF004L14 <--------------------------------------------------------------------------rJMFF004L14 268 -------------------------------------------------------------------------------------------->JMSF045L23 <----------------------------------------------------------------------rJMSF045L23 283 ------------------------------>JMSF010B17 <----------------------------------------------------------------------------rJMSF010B17 290 ----------------------------------------->JMSF011L12 <------------------------------------------------------------------------rJMSF011L12 297 ---------------------------------------------------->JMFF036H05 <----------------------------------------------------------------------------rJMFF036H05 ------------------------------------------------------------------------------->JMSF024P03-