List of clones in pair P000103.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C22Sequence222008093 (11)gb|ADZ29096.1|3e-181-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]724001233 (12)gb|ADZ29096.1|6e-1051-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMFF012N19Sequence659001233 (12)gb|ADZ29096.1|1e-651-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMFF025P04Sequence503008093 (11)gb|ADZ29096.1|4e-821-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]689001233 (12)gb|ADZ29096.1|1e-1081-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMFF035P15Sequence682001233 (12)gb|ADZ29096.1|4e-981-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMFF036O22Sequence581008093 (11)gb|ADZ29096.1|3e-1021-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]707001233 (12)gb|ADZ29096.1|4e-1011-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMFF049B14Sequence618008093 (11)gb|ADZ29096.1|7e-1101-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]627001233 (12)gb|AFK38815.1|2e-47unknown [Lotus japonicus]
JMFF049C07Sequence481008093 (11)gb|ADZ29096.1|5e-801-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]409001233 (12)
JMFS008C07Sequence614008093 (11)gb|ADZ29096.1|2e-1171-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMSF009J18Sequence382008093 (11)gb|ADZ29096.1|3e-401-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]687001233 (12)gb|ADZ29096.1|4e-1061-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMSF016A08Sequence421008093 (11)gb|ADZ29096.1|7e-691-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]745001233 (12)gb|ADZ29096.1|8e-1191-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMSF026P17Sequence664008093 (11)gb|ADZ29096.1|3e-1281-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]741001233 (12)gb|ADZ29096.1|2e-1171-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMSF041M18Sequence815008093 (11)gb|ADZ29096.1|4e-1591-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]790001233 (12)gb|ADZ29096.1|1e-1401-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]
JMSF050N11Sequence652008093 (11)gb|ADZ29096.1|2e-1161-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]770001233 (12)gb|ADZ29096.1|7e-1201-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea batatas]

Contig 8093 BLAST Hits against nr-aa DB Show

Contig 1233 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008093============================================ 815         ============================================Contig001233============================================ 984
  20   ---------------------------------------------------------->JMFF049C07                                                                                                    <-----------------------------------------rJMFF049C07  
  20   --------------------------------------------------------------------------->JMFF049B14                                                             <---------------------------------------------------------------rJMFF049B14  
 131  ---------------------------------------------------------------------->JMFF036O22                                               <-----------------------------------------------------------------------rJMFF036O22  
 144 ------------------------------------------------------------------------------->JMSF050N11                              <-----------------------------------------------------------------------------rJMSF050N11  
 151     -------------------------->JMFF003C22                                                                                      <-------------------------------------------------------------------------rJMFF003C22  
 175   ---------------------------------------------->JMSF009J18                                                                    <---------------------------------------------------------------------rJMSF009J18  
 181  ----------------------------------------------------------->JMFF025P04                                                       <---------------------------------------------------------------------rJMFF025P04  
 198     --------------------------------------------------->JMSF016A08                                                       <--------------------------------------------------------------------------rJMSF016A08  
 200     -------------------------------------------------------------------------------->JMSF026P17                          <--------------------------------------------------------------------------rJMSF026P17  
 205  -------------------------------------------------------------------------------------------------->JMSF041M18   <-------------------------------------------------------------------------------rJMSF041M18  
          -------------------------------------------------------------------------->JMFS008C07-                      
                                                                                                                                            <------------------------------------------------------------------rJMFF012N19- 
                                                                                                                                      <---------------------------------------------------------------------rJMFF035P15-