List of clones in pair P000065.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006G24Sequence607005940 (18)ref|XP_010446199.1|2e-119PREDICTED: actin-85C [Camelina sativa]689004110 (14)gb|AFD62266.1|2e-87actin, partial [Persea americana]
JMFF011L21Sequence491005940 (18)gb|AET50987.1|2e-98actin [Lactuca sativa]684004110 (14)gb|AFD62266.1|1e-88actin, partial [Persea americana]
JMFF014B07Sequence456005940 (18)ref|XP_010485236.1|1e-81PREDICTED: actin-4-like [Camelina sativa]470004110 (14)dbj|BAB60900.1|1e-35actin [Ipomoea nil]
JMFF015P07Sequence571005940 (18)ref|XP_010485236.1|4e-112PREDICTED: actin-4-like [Camelina sativa]527004110 (14)dbj|BAB60900.1|4e-50actin [Ipomoea nil]
JMFF016B24Sequence502005940 (18)ref|XP_010485236.1|5e-92PREDICTED: actin-4-like [Camelina sativa]207004110 (14)dbj|BAB60900.1|5e-33actin [Ipomoea nil]
JMFF016O23Sequence573005940 (18)ref|XP_010485236.1|3e-110PREDICTED: actin-4-like [Camelina sativa]750004110 (14)gb|AFD62266.1|5e-100actin, partial [Persea americana]
JMFF018O22Sequence539005940 (18)ref|XP_010485236.1|4e-102PREDICTED: actin-4-like [Camelina sativa]668004110 (14)gb|AFP43696.1|2e-95actin4, partial [Eriobotrya japonica]
JMFF025G13Sequence556005940 (18)ref|XP_010485236.1|5e-107PREDICTED: actin-4-like [Camelina sativa]677004110 (14)gb|AFD62266.1|1e-87actin, partial [Persea americana]
JMFF031J24Sequence575005940 (18)ref|XP_010485236.1|7e-113PREDICTED: actin-4-like [Camelina sativa]181004110 (14)
JMFF043M04Sequence652005940 (18)ref|XP_010446199.1|1e-129PREDICTED: actin-85C [Camelina sativa]543004110 (14)dbj|BAB60900.1|6e-49actin [Ipomoea nil]
JMSF004A06Sequence245005940 (18)emb|CDX67573.1|1e-26BnaA07g16130D [Brassica napus]
JMSF013K18Sequence529005940 (18)ref|XP_010485236.1|7e-99PREDICTED: actin-4-like [Camelina sativa]645004110 (14)gb|AFD62266.1|3e-85actin, partial [Persea americana]
JMSF016A13Sequence486005940 (18)ref|XP_010485236.1|9e-90PREDICTED: actin-4-like [Camelina sativa]716004110 (14)gb|AFP43696.1|6e-91actin4, partial [Eriobotrya japonica]
JMSF028B11Sequence276004110 (14)gb|AFD62266.1|3e-27actin, partial [Persea americana]
JMSF040N06Sequence681005940 (18)ref|XP_010446199.1|4e-138PREDICTED: actin-85C [Camelina sativa]744004110 (14)ref|XP_011091473.1|1e-82PREDICTED: actin-11 [Sesamum indicum] ref|XP_011091474.1| PREDICTED: actin-11 [S

Contig 5940 BLAST Hits against nr-aa DB Show

Contig 4110 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005940============================================ 736         ============================================Contig004110============================================ 813
   4 --------------------------------------------------------------------------------------->JMFF043M04                                                <------------------------------------------------------------------rJMFF043M04  
   6 ----------------------------------------------------------------------------->JMFF016O23                                 <-------------------------------------------------------------------------------------------rJMFF016O23  
  31  -------------------------------------------------------------------------->JMFF025G13                                         <----------------------------------------------------------------------------------rJMFF025G13  
  31  --------------------------------------------------------------------------------->JMFF006G24                                <------------------------------------------------------------------------------------rJMFF006G24  
  32  ------------------------------------------------------------->JMFF014B07                                                                               <---------------------------------------------------------rJMFF014B07  
  35  ----------------------------------------------------------------------------->JMFF015P07                                                        <----------------------------------------------------------------rJMFF015P07  
  39  ----------------------------------------------------------------------------->JMFF031J24                                                                                                  <---------------------rJMFF031J24  
  44  ----------------------------------------------------------------->JMSF016A13                                           <---------------------------------------------------------------------------------------rJMSF016A13  
  60 ----------------------------------------------------------------------->JMSF013K18                                            <-------------------------------------------------------------------------------rJMSF013K18  
  70 ------------------------------------------------------------------------------------------->JMSF040N06           <-------------------------------------------------------------------------------------------rJMSF040N06  
  79 ------------------------------------------------------------------------>JMFF018O22                                       <---------------------------------------------------------------------------------rJMFF018O22  
 273                                  ------------------------------------------------------------------>JMFF011L21                <-----------------------------------------------------------------------------------rJMFF011L21  
 305 ------------------------------------------------------------------->JMFF016B24                                                                         <------------------------rJMFF016B24  
      -------------------------------->JMSF004A06-                                                                    
     -------------------------------------------------------------------------------------------->JMSF032H11*         
     --------------------------------->JMSF010B15*                                                                    
                   -------------------------------------------------------------------------->JMFF042I17*             
     -------------------------------------------------------------------------->JMFF013E07*                           
                                                                                                                                                            <--------------------------------rJMSF028B11-