Contig 004110:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006G24Sequence607005940 (18)ref|XP_010446199.1|2e-119PREDICTED: actin-85C [Camelina sativa]689004110 (14)gb|AFD62266.1|2e-87actin, partial [Persea americana]
JMFF011L21Sequence491005940 (18)gb|AET50987.1|2e-98actin [Lactuca sativa]684004110 (14)gb|AFD62266.1|1e-88actin, partial [Persea americana]
JMFF014B07Sequence456005940 (18)ref|XP_010485236.1|1e-81PREDICTED: actin-4-like [Camelina sativa]470004110 (14)dbj|BAB60900.1|1e-35actin [Ipomoea nil]
JMFF015P07Sequence571005940 (18)ref|XP_010485236.1|4e-112PREDICTED: actin-4-like [Camelina sativa]527004110 (14)dbj|BAB60900.1|4e-50actin [Ipomoea nil]
JMFF016B24Sequence502005940 (18)ref|XP_010485236.1|5e-92PREDICTED: actin-4-like [Camelina sativa]207004110 (14)dbj|BAB60900.1|5e-33actin [Ipomoea nil]
JMFF016O23Sequence573005940 (18)ref|XP_010485236.1|3e-110PREDICTED: actin-4-like [Camelina sativa]750004110 (14)gb|AFD62266.1|5e-100actin, partial [Persea americana]
JMFF018O22Sequence539005940 (18)ref|XP_010485236.1|4e-102PREDICTED: actin-4-like [Camelina sativa]668004110 (14)gb|AFP43696.1|2e-95actin4, partial [Eriobotrya japonica]
JMFF025G13Sequence556005940 (18)ref|XP_010485236.1|5e-107PREDICTED: actin-4-like [Camelina sativa]677004110 (14)gb|AFD62266.1|1e-87actin, partial [Persea americana]
JMFF031J24Sequence575005940 (18)ref|XP_010485236.1|7e-113PREDICTED: actin-4-like [Camelina sativa]181004110 (14)
JMFF043M04Sequence652005940 (18)ref|XP_010446199.1|1e-129PREDICTED: actin-85C [Camelina sativa]543004110 (14)dbj|BAB60900.1|6e-49actin [Ipomoea nil]
JMSF013K18Sequence529005940 (18)ref|XP_010485236.1|7e-99PREDICTED: actin-4-like [Camelina sativa]645004110 (14)gb|AFD62266.1|3e-85actin, partial [Persea americana]
JMSF016A13Sequence486005940 (18)ref|XP_010485236.1|9e-90PREDICTED: actin-4-like [Camelina sativa]716004110 (14)gb|AFP43696.1|6e-91actin4, partial [Eriobotrya japonica]
JMSF028B11Sequence276004110 (14)gb|AFD62266.1|3e-27actin, partial [Persea americana]
JMSF040N06Sequence681005940 (18)ref|XP_010446199.1|4e-138PREDICTED: actin-85C [Camelina sativa]744004110 (14)ref|XP_011091473.1|1e-82PREDICTED: actin-11 [Sesamum indicum] ref|XP_011091474.1| PREDICTED: actin-11 [S

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040N06+ GCGGAGCGAGAAATTGTTAGAGATATGAAGGAG
                      ____________________________________________________________
consensus GCGGAGCGAGAAATTGTTAGAGATATGAAGGAG
 
. : . : . : . : . : . :
rJMSF040N06+ AAGTTATCCTACATTGCTCTTGACTATGAACAAGAGCTGGAAACATCAAAGACCAGCTCA
rJMSF016A13+ TGAACAAGAGCTGGAAACATCAAAGACCAGCTCA
rJMFF018O22+ CTGGAAACATCAAAGACCAGCTCA
rJMFF016O23+ TGAACAAGAGCTGGAAACATCAAAGACCAGCTCA
                      ____________________________________________________________
consensus AAGTTATCCTACATTGCTCTTGACTATGAACAAGAGCTGGAAACATCAAAGACCAGCTCA
 
. : . : . : . : . : . :
rJMSF040N06+ GCTGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMSF016A13+ GCTGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMFF025G13+ ACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMFF006G24+ TGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMFF018O22+ GCTGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMFF011L21+ TACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMSF013K18+ ACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
rJMFF016O23+ GCTGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
                      ____________________________________________________________
consensus GCTGTGGAGAAGAGCTACGAGTTGCCTGATGGACAAGTGATTACCATCGGTAATGAGCGG
 
. : . : . : . : . : . :
rJMSF040N06+ TTCCGCTGCCCAGAGGTTNTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCT--CATT
rJMSF016A13+ TTCCGCTGCCCAGAGGTTCTCTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMFF025G13+ TTCCGCTGCCCAGAGGTTNTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMFF006G24+ TTCCGCTGCCCAGAGGTTNTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMFF018O22+ TTCCGCTGCCCAGAGGTTNTTTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMFF011L21+ TTCCGCTGCCCAGAGGTTNTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMSF013K18+ TTCCGCTGCCCAGAGGTTCTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
rJMFF016O23+ TTCCGCTGCCCAGAGGTTNTNTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
                      ____________________________________________________________
consensus TTCCGCTGCCCAGAGGTTCTTTTCCAGCCATCGATCATCGGGATGGAAGCTGCTGGCATT
 
. : . : . : . : . : . :
rJMSF040N06+ CATGAAACTACTTACAATTCCATCNTGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
rJMSF016A13+ CATGAAACTACTTACAATTCCATCNTGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
rJMFF025G13+ CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATNTTTAT
rJMFF006G24+ CATGAAACTNCTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
rJMFF018O22+ CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATNTTTAT
rJMFF011L21+ CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATNTTTAT
rJMSF013K18+ CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
rJMFF015P07+ AGGAAGGATNTTTAT
rJMFF016O23+ CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
rJMFF043M04+ TTAT
                      ____________________________________________________________
consensus CATGAAACTACTTACAATTCCATCATGAAGTGTGACGTGGATATTAGGAAGGATCTTTAT
 
. : . : . : . : . : . :
rJMSF028B11+ TTCGGGGGCNNTGCTGATAGGNTGAGC
rJMSF040N06+ GGAAACNTTGTCCTCAGTGGTGGTACCNCTATGTTCGGGGGCNTTGCTGATAGGATGAGC
rJMSF016A13+ GGAAACNTTGTCCTCAGTGGNGGTACCNCTATGTTCGGGGGCNTTGCTGATAGGATGAGC
rJMFF025G13+ GGAAACATTGTCCTCAGTGGTGGTACCACTATGTTCGGGGGCATTGCTGATAGGATGAGC
rJMFF006G24+ GGAAACATTGTCCTCAGTGGTGGTACCNCTATGTTNGGGGGCATTGCTGATAGGATGAGC
rJMFF018O22+ GGAAACATTGTCCTCAGTGGTGGTACCNCTATGTTNGGGGGCATTGCTGATAGGATGAGC
rJMFF016B24+ GGGGGCATTGCTGATNGGATGAGC
rJMFF011L21+ GGAAACATTGTCCTCAGTGGTGGTACCACTATGTTCGGGGGCATTGCTGATAGGATGAGC
rJMSF013K18+ GGAAACATTGTCCTCAGTGGNGGTACCNCTATGTTCGGGGGCNTTGCTGATAGGATGAGC
rJMFF014B07+ ATTGCTGATAGGATGAGC
rJMFF015P07+ GGAAACATTGTCCTCAGTGGTGGTACCACTATGTTCGGGGGCATTGCTGATAGGATGAGC
rJMFF016O23+ GGAAACATTGTCCTCAGTGGTGGTACCNCTATGTTCGGGGGCATTGCTGATAGGATGAGC
rJMFF043M04+ GGAAACATNGTCCTCAGTGGTGGTACCACTATGTTCGGGGGCATTGCTGATAGGATGAGC
                      ____________________________________________________________
consensus GGAAACATTGTCCTCAGTGGTGGTACCACTATGTTCGGGGGCATTGCTGATAGGATGAGC
 
. : . : . : . : . : . :
rJMSF028B11+ AAGGAGATCNCNGCTTTGGCTCCGAGTAGCNNGAAGATAAAGGNTGTTGCCCCNCCTGAG
rJMSF040N06+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMSF016A13+ AAGGAGATCACNGCTTTGGCTCCGAGTAGCNTGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF025G13+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF006G24+ AAGGAGATCNCAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCNCCTGAG
rJMFF018O22+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF016B24+ AAGGAGATCNCAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF011L21+ AAGGAGATCNCAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMSF013K18+ AAGGAGATCNCAGCTTTGGCTCCGAGTAGCNTGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF014B07+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTNCCCCNCCTGAG
rJMFF015P07+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF016O23+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
rJMFF043M04+ AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
                      ____________________________________________________________
consensus AAGGAGATCACAGCTTTGGCTCCGAGTAGCATGAAGATAAAGGTTGTTGCCCCGCCTGAG
 
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rJMSF028B11+ AGGAAGTACNGTGTGTGGATTGGAGGATNTATTTTGGCCTCCCTGAGCNCNTTCCNACNG
rJMSF040N06+ AGGAAGTACAGTGTGTGGATTGGAGGATCTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMSF016A13+ AGGAAGTACNGTGTGTGGATTGGAGGATCTATTTTGGCCTCCCTGAGCACATTCCAACNG
rJMFF025G13+ AGGAAGTACAGTGTGTGGATTGGAGGATNTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF006G24+ AGGAAGTNCAGTGTGTGGATTGGAGGATTTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF018O22+ AGGAAGTACAGTGTGTGGATTGGAGGATTTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF016B24+ AGGAANTACAGTGTGTGGATTGGAGGATNTNTTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF011L21+ AGGAAGTACAGTGTGTGGATTGGAGGATNTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMSF013K18+ AGGAAGTACNGTGTGTGGATTGGAGGATCTATTTTGGCCTCCCTGAGCNCATTCCAACAG
rJMFF014B07+ AGGAAGTNCAGTGTGTGGATTGGAGGATNTATTTTGGCCTCCCTGAGCNCATTCCAACAG
rJMFF015P07+ AGGAAGTNCAGTGTGTGGATTGGAGGATTTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF016O23+ AGGAAGTACAGTGTGTGGATTGGAGGATNTATTTTGGCCTCCCTGAGCACATTCCAACAG
rJMFF043M04+ AGGAAGTACAGTGTGTGGATTGGAGGATCTATTTTGGCCTCCCTGAGCACATTCCAACAG
                      ____________________________________________________________
consensus AGGAAGTACAGTGTGTGGATTGGAGGATCTATTTTGGCCTCCCTGAGCACATTCCAACAG
 
. : . : . : . : . : . :
rJMSF028B11+ ANGTGGATAGCAAAGGCNGAGTNTGATGAATCNGGNCCCTCGATTGTTCATNGGAAANGC
rJMSF040N06+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCNGGACCCTCGATTGTTCATAGGAAATGC
rJMSF016A13+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCNGGACCCTCGATTGTTC--NGGAAATGC
rJMFF025G13+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF006G24+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF018O22+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF016B24+ ATNTGGATAGCNAAGGCAGAGTATGATGAATCAGGACCCTNGATTGTTCATAGGAAA
rJMFF011L21+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMSF013K18+ ATGTGGATAGCAAAGGCNGAGTATGATGAATCNGGACCCTCGATTGTTCATAGGAAATGC
rJMFF014B07+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF015P07+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF016O23+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
rJMFF043M04+ ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
                      ____________________________________________________________
consensus ATGTGGATAGCAAAGGCAGAGTATGATGAATCAGGACCCTCGATTGTTCATAGGAAATGC
 
. : . : . : . : . : . :
rJMSF028B11+ TTNTAAATGCTGCNTGCTGGGAAAGAGACNTNNGGAGAGATTTATACNAGCTGTGCTATG
rJMSF040N06+ TTNTAAATGCTGCATGCTGGGAAAGAGACATCTGGAGAGATTTATACNAGCTGTGCTATG
rJMSF016A13+ TTNTAAATGCTGCNTGCTGGGAAAGAGACATCTGGAGAGATTTATACNAGCTGTGCTATG
rJMFF025G13+ TTNTAAATGCTGCATGCTGGGAAAGAGACATNTGGAGAGATTTATACAAGCTGTGCTATG
rJMFF006G24+ TTTTAAATGCTGCATGCTGGGAAAGAGACATTTGGAGAGATTTATACAAGCTGTGCTATG
rJMFF018O22+ TTTTAAATGCTGCATGCTGGGAAAGAGACATNTGGAGAGATTTATACAAGCTGTGCTATG
rJMFF011L21+ TTTTAAATGCTGCATGCTGGG-AAGAGACATNTGGAGAGATTTATACAAGCTGTGCTATG
rJMSF013K18+ TTNTAAATGCTGCNTGCTGGGAAAGAGACATCTGGAGAGATTTATACNAGCTGTGCTATG
rJMFF014B07+ TTTTAAATGCTGCATGCTGGGAAAGAGACATNTGGAGAGATTTATNCAAGCTGTGCTATG
rJMFF015P07+ TTTTAAATGCTGCATGCTGGGAAAGAGACATNTGGAGAGATTTATACAAGCTGTGCTATG
rJMFF016O23+ TTTTAAATGCTGCATGCTGGGAAAGAGACATNTGGAGAGATTTATACAAGCTGTGCTATG
rJMFF043M04+ TTCTAAATGCTGCATGCTGGGAAAGAGACATCTGGAGAGATTTATACAAGCTGTGCTATG
                      ____________________________________________________________
consensus TTTTAAATGCTGCATGCTGGGAAAGAGACATCTGGAGAGATTTATACAAGCTGTGCTATG
 
. : . : . : . : . : . :
rJMSF028B11+ AAAAC
rJMSF040N06+ AAAACAGCTTCTCCTCAGNTGCTATGCTGCTTCCTTCTCATTTGTTATTTTACTTATTGT
rJMSF016A13+ AAAACAGCTTCTCCTCAGNTGCTATGCTGCTTCCTTCTCATTTGTTATTTTACNTATTGT
rJMFF025G13+ AAAACAGCTTNTCCTCAGTTGCTATGCTGCTTCCTTNTCATTTGTTATTTTACTTATTGT
rJMFF006G24+ AAAACAGCTTNTCCTCAGTTGCTATGCTGCTTCCTTNTCATTTGTTATTTTACTTATTGT
rJMFF018O22+ AAAACAGCTTCTCCTCAGTTGCTATGCTGCTTCCTTNTCATTTGTTATTTTACTTATTGT
rJMFF011L21+ AAAACAGCTTNTCCTCAGTTGNTATGCTGCTTCCTTNTCATTTGTTATTTTACTTATTGT
rJMSF013K18+ AAAACAGCTTCTCCTCAGNTGCTATGCTGCTTCCTTCTCNTTTGTTATTTTACTTATTGT
rJMFF014B07+ AAAACAGCTTCTCCTCAGTTGCTATGCTGCTTCCTTCTCATTTGTTATTTTACTTATTGT
rJMFF015P07+ AAAACAGCTTNTCCTCAGTTGCTATGCTGCTTCCTTCTCATTTGTTATTTTACTTATTGT
rJMFF031J24+ TGCTTCCTTNTCATTCGTTATTTTNNTTANNGT
rJMFF016O23+ AAAACAGCTTNTCCTCAGTTGCTATGCTGCTTCCTTNTCATTTGTTATTTTACTTATTGT
rJMFF043M04+ AAAACAGCTTCTCCTCAGTTGCTATGCTGCTTCCTTCTCATCTGTTATTTTACTTATTGT
                      ____________________________________________________________
consensus AAAACAGCTTCTCCTCAGTTGCTATGCTGCTTCCTTCTCATTTGTTATTTTACTTATTGT
 
. : . : . : . : . : . :
rJMSF040N06+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCNGTGGAGACACAAAACNGG
rJMSF016A13+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCNGTGGAGACNC-AAACNGG
rJMFF025G13+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF006G24+ TTTCTTTANGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF018O22+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF011L21+ TTTCTTTANGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMSF013K18+ TTTCTTTATGTTCNTTCTTTCGAGTTTTTCAAGATTTGGCCNGNGGAGACNC--AACNGG
rJMFF014B07+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF015P07+ TTTCTTTANGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF031J24+ TTTCNTTATGNTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGNGGAGACAC-AAACAGG
rJMFF016O23+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
rJMFF043M04+ TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
                      ____________________________________________________________
consensus TTTCTTTATGTTCATTCTTTCGAGTTTTTCAAGATTTGGCCAGTGGAGACAC-AAACAGG
 
. : . : . : . : . : . :
rJMSF040N06+ ATCTTGGCNTTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTT
rJMSF016A13+ ATCTTGGCNTTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF025G13+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF006G24+ ATNTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF018O22+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTG
rJMFF011L21+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMSF013K18+ ATCTTGGCNTTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF014B07+ ATNTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF015P07+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF031J24+ ATNTTGGCANTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTNGTCTACTTTTATGTTA
rJMFF016O23+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
rJMFF043M04+ ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
                      ____________________________________________________________
consensus ATCTTGGCATTTTTTTTTTGTTAGTATTGCTATTAAGAAGATTTGTCTACTTTTATGTTA
 
. : . : . : . : . : . :
rJMSF016A13+ TTTGGATTTCTGATAAATGAACAT
rJMFF025G13+ TTTGGATTTCTGATAAATGAACATTCTCACTACT
rJMFF006G24+ TTTGGATTTCTGATAAATGAACATTCTCACTACT
rJMFF011L21+ TTTGGATTTCTGATAAATGAACATTCTCACTACT
rJMSF013K18+ TTT
rJMFF014B07+ TTTGGATTTCTGATAAATGAACATTCTCACTAC
rJMFF015P07+ TTTGGATTTCTGATAAATGAACATTCTCACTAC
rJMFF031J24+ TTTGGATTTCTGATAAATGAACATTCTCA
rJMFF016O23+ TTTGGATTTCTGATAAATGAACATTCTCACTACTGTCAACATGGAGAATTGTTATAT
rJMFF043M04+ TTTGGATTTCTGATAAATGAACATTCTCACTACTGTCAACATGGAGAATTGTTATATGTT
                      ____________________________________________________________
consensus TTTGGATTTCTGATAAATGAACATTCTCACTACTGTCAACATGGAGAATTGTTATATGTT