List of clones in pair P000025.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001F22Sequence307000573 (73)pdb|1ZEQ|X6e-36Chain X, 1.5 A Structure Of Apo-Cusf Residues 6-88 From Escherichia Coli
JMFF002C09Sequence245000573 (73)pdb|2VB2|X7e-18Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF005E18Sequence258000573 (73)pdb|2VB2|X6e-21Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF009B05Sequence343000573 (73)gb|EJL17496.1|3e-41periplasmic copper/silver-binding protein [Shigella flexneri 6603-63]
JMFF015M17Sequence257000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF017A15Sequence251000573 (73)pdb|2VB2|X2e-19Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF017K17Sequence248000573 (73)pdb|2VB2|X1e-18Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF019K19Sequence244000573 (73)pdb|2VB2|X2e-19Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF020A14Sequence250000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF022D23Sequence309000573 (73)pdb|1ZEQ|X1e-35Chain X, 1.5 A Structure Of Apo-Cusf Residues 6-88 From Escherichia Coli
JMFF022F14Sequence174000573 (73)
JMFF022M16Sequence256000573 (73)pdb|2VB2|X3e-21Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF022O06Sequence257000573 (73)pdb|2VB2|X3e-21Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF023M13Sequence257000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF024M20Sequence257000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF026A11Sequence311000573 (73)ref|WP_032233950.1|5e-29copper-binding protein, partial [Escherichia coli]
JMFF026L17Sequence331000573 (73)ref|WP_001612578.1|6e-37cation efflux system protein CusF [Escherichia coli] gb|ELH42630.1| cation efflu
JMFF027C24Sequence257000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF027I23Sequence220000573 (73)gb|EGJ94078.1|3e-10cation efflux system protein cusF [Shigella flexneri K-671]
JMFF029N22Sequence305000573 (73)pdb|2VB2|X6e-32Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF030I14Sequence250000573 (73)pdb|2VB2|X4e-17Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF034G05Sequence257000573 (73)pdb|2VB2|X3e-21Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMFF041D05Sequence656000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea622004138 (18)ref|WP_032209146.1|5e-147membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF041D11Sequence657000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea652004138 (18)ref|WP_032209146.1|7e-153membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF041D12Sequence652000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea623004138 (18)ref|WP_032338442.1|6e-147membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF041F22Sequence657000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea637004138 (18)ref|WP_032209146.1|2e-150membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF041H13Sequence657000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea672004138 (18)ref|WP_032209146.1|2e-148membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF041J01Sequence657000573 (73)ref|WP_000709870.1|4e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea648004138 (18)ref|WP_032209146.1|1e-153membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF043C03Sequence626000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea641004138 (18)ref|WP_032338442.1|4e-148membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF043L17Sequence623000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea632004138 (18)ref|WP_032209146.1|2e-149membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF045H04Sequence610000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea632004138 (18)ref|WP_032209146.1|2e-149membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF046D16Sequence473000573 (73)ref|WP_000709870.1|7e-60MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea468004138 (18)ref|WP_032338442.1|4e-104membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF047H10Sequence607000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea584004138 (18)ref|WP_032338442.1|3e-135membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF047H21Sequence601000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea632004138 (18)ref|WP_032338442.1|3e-148membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF047J05Sequence607000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea603004138 (18)ref|WP_032209146.1|2e-140membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF048L21Sequence476000573 (73)ref|WP_000709870.1|4e-73MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea414004138 (18)ref|WP_032338442.1|9e-90membrane protein, partial [Escherichia sp. 4_1_40B]
JMFF049D24Sequence643000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea646004138 (18)ref|WP_032209146.1|8e-153membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF049L16Sequence645000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea620004138 (18)ref|WP_032209146.1|4e-146membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF049P12Sequence590000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea602004138 (18)ref|WP_032209146.1|1e-141membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF050L20Sequence615000573 (73)ref|WP_000709870.1|2e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea608004138 (18)ref|WP_032209146.1|7e-135membrane protein, partial [Escherichia coli] gb|EZD18098.1| hypothetical protein
JMFF051E19Sequence621000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea
JMSF001A04Sequence266000573 (73)pdb|2VB2|X3e-24Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF002G09Sequence467000573 (73)ref|WP_000709870.1|4e-73MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea
JMSF003O12Sequence253000573 (73)pdb|2VB2|X3e-20Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF007O11Sequence239000573 (73)pdb|2VB2|X6e-17Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF010A08Sequence257000573 (73)pdb|2VB2|X4e-22Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF013L17Sequence179000573 (73)pdb|3E6Z|X4e-05Chain X, 1.0 A Structure Of Cusf-W44a-Cu(Ii) Residues 10-88 From Escherichia Co
JMSF018M24Sequence199000573 (73)pdb|2VB2|X2e-16Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF021J11Sequence375000573 (73)ref|WP_001224007.1|2e-53cation transporter [Escherichia coli] gb|EHN90401.1| cation efflux system protei
JMSF023B12Sequence399000573 (73)ref|WP_001612578.1|1e-57cation efflux system protein CusF [Escherichia coli] gb|ELH42630.1| cation efflu
JMSF024G09Sequence531000573 (73)ref|WP_001612578.1|4e-71cation efflux system protein CusF [Escherichia coli] gb|ELH42630.1| cation efflu
JMSF024O18Sequence342000573 (73)ref|WP_001597667.1|2e-53cation efflux system protein CusF [Escherichia coli] gb|ELG64798.1| cation efflu
JMSF026D05Sequence162000573 (73)pdb|2VB2|X1e-25Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF027N12Sequence251000573 (73)pdb|2VB2|X6e-26Chain X, Crystal Structure Of Cu(I)cusf pdb|2VB3|X Chain X, Crystal Structure Of
JMSF028H21Sequence649000573 (73)ref|WP_000709873.1|2e-71MULTISPECIES: cation transporter [Enterobacteriaceae] ref|NP_706420.1| periplasm
JMSF028O16Sequence632000573 (73)ref|WP_000709870.1|3e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea
JMSF036I11Sequence638000573 (73)ref|WP_000709870.1|2e-71MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea
JMSF039P19Sequence493000573 (73)ref|WP_000709873.1|1e-67MULTISPECIES: cation transporter [Enterobacteriaceae] ref|NP_706420.1| periplasm
JMSF041B20Sequence786000573 (73)ref|WP_000709870.1|2e-71MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea
JMSF051B23Sequence686000573 (73)ref|WP_000709870.1|6e-72MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea

Contig 573 BLAST Hits against nr-aa DB Show

Contig 4138 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000573============================================ 786         ============================================Contig004138============================================ 681
  10  ---------------------------------------------------------------------------->JMFF047H10                                       <-------------------------------------------------------------------------------------rJMFF047H10  
  19  ----------------------------------------------------------------------------------->JMFF041D11                      <----------------------------------------------------------------------------------------------rJMFF041D11  
  19  ----------------------------------------------------------------------------------->JMFF041H13                  <--------------------------------------------------------------------------------------------------rJMFF041H13  
  19  ----------------------------------------------------------------------------------->JMFF041J01                      <----------------------------------------------------------------------------------------------rJMFF041J01  
  20  ---------------------------------------------------------->JMFF046D16                                                                        <--------------------------------------------------------------------rJMFF046D16  
  20  -------------------------------------------------------------------------->JMFF049P12                                     <---------------------------------------------------------------------------------------rJMFF049P12  
  20  --------------------------------------------------------------------------->JMFF047H21                               <--------------------------------------------------------------------------------------------rJMFF047H21  
  20  ---------------------------------------------------------------------------->JMFF047J05                                  <----------------------------------------------------------------------------------------rJMFF047J05  
  20  ----------------------------------------------------------------------------->JMFF045H04                             <--------------------------------------------------------------------------------------------rJMFF045H04  
  20  ----------------------------------------------------------------------------->JMFF050L20                                 <----------------------------------------------------------------------------------------rJMFF050L20  
  20  ------------------------------------------------------------------------------>JMFF043L17                            <--------------------------------------------------------------------------------------------rJMFF043L17  
  20  ------------------------------------------------------------------------------->JMFF043C03                          <---------------------------------------------------------------------------------------------rJMFF043C03  
  20  --------------------------------------------------------------------------------->JMFF049D24                       <----------------------------------------------------------------------------------------------rJMFF049D24  
  20  --------------------------------------------------------------------------------->JMFF049L16                           <------------------------------------------------------------------------------------------rJMFF049L16  
  20  ---------------------------------------------------------------------------------->JMFF041D12                          <------------------------------------------------------------------------------------------rJMFF041D12  
  20  ----------------------------------------------------------------------------------->JMFF041F22                      <---------------------------------------------------------------------------------------------rJMFF041F22  
  30  ---------------------------------------------------------------------------------->JMFF041D05                         <------------------------------------------------------------------------------------------rJMFF041D05  
  35    ------------------------------------------------------->JMFF048L21                                                                                 <------------------------------------------------------------rJMFF048L21  
     --------------------------------------------->JMSF005J02*                                                        
             ---------------->JMFF005M24*                                                                             
      -------------------------->JMFF027I23-                                                                          
     ------------------------------->JMFF030I14-                                                                      
        ----------------------------------------->JMFF026L17-                                                         
     ------------------------------>JMFF002C09-                                                                       
     ------------------------------------------------->JMSF004E10*                                                    
      ------------------------------->JMFF027C24-                                                                     
      ------------------------------>JMFF019K19-                                                                      
      ------------------------------->JMFF022O06-                                                                     
      ----------------------->JMFF032O11*                                                                             
     ------------------------------------------------------------->JMSF039P19-                                        
           ------------------------------------------->JMSF024O18-                                                    
          ------------------------>JMSF018M24-                                                                        
      -------------------------------->JMSF001A04-                                                                    
     --------------------------------->JMSF007A16#                                                                    
             ---------------------------------->JMSF029F13*                                                           
      ------------------------------>JMFF017K17-                                                                      
     --------------------------------------------------------------------------------------------------->JMSF041B20-  
     -------------------------------------->JMFF029N22-                                                               
       ----------------------------------------------->JMSF021J11-                                                    
      --------------------->JMFF022F14-                                                                               
       ------------------------------>JMSF027N12-                                                                     
      ------------------------------------------------------------------>JMSF024G09-                                  
      ------------------------------->JMFF015M17-                                                                     
      ------------------------------------------>JMFF009B05-                                                          
     ------------------------------->JMFF024M20-                                                                      
                 --------------------->JMSF044M12*                                                                    
      ------------------------------->JMFF017A15-                                                                     
     -------------------------------------------------------------------------------------->JMSF051B23-               
        -------------------------------------------------->JMSF023B12-                                                
     ---------------------------------------------------------->JMSF002G09-                                           
     -------------------------------->JMFF034G05-                                                                     
     ------------------------------------------------------------------------------->JMSF028O16-                      
     -------------------------------->JMFF023M13-                                                                     
      --------------------------------->JMFF024N08#                                                                   
          --------------------------------->JMSF006L03*                                                               
                   -------------------->JMSF026D05-                                                                   
     -------------------------------->JMFF005E18-                                                                     
     ------------------------------->JMSF009H16*                                                                      
     -------------------------------->JMFF022M16-                                                                     
     ----------------------------->JMSF007O11-                                                                        
     ------------------------------------------------------->JMSF005F18*                                              
      ------------------------------->JMFF020A14-                                                                     
     ------------------------------->JMSF003O12-                                                                      
      ------------------------------------------------------------------------------>JMFF051E19-                      
     -------------------------------------------------------------------------------->JMSF036I11-                     
      -------------------------------------->JMFF026A11-                                                              
     -------------------------------------->JMFF001F22-                                                               
        ---------------------->JMSF013L17-                                                                            
     ------------------------------->JMSF010A08-                                                                      
          ----------------->JMSF007G05#                                                                               
     -------------------------------------->JMFF022D23-                                                               
     ---------------------------------------------------------------------------------->JMSF028H21-                   
     ---------------------------------------------------->JMSF039F24*