List of clones in pair P000014.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F23Sequence615007440 (23)gb|ACF17656.1|3e-125putative glutamine synthase 2 [Capsicum annuum]776013630 (24)gb|AAB61302.1|3e-91chloroplastic glutamine synthetase [Helianthus annuus]
JMFF012N07Sequence510007440 (23)gb|ACF17656.1|8e-83putative glutamine synthase 2 [Capsicum annuum]776013630 (24)ref|XP_010450398.1|3e-101PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMFF018J02Sequence487007440 (23)gb|ACF17656.1|4e-68putative glutamine synthase 2 [Capsicum annuum]
JMFF038E22Sequence592007440 (23)gb|ACF17656.1|5e-55putative glutamine synthase 2 [Capsicum annuum]732013630 (24)gb|AAB61302.1|5e-97chloroplastic glutamine synthetase [Helianthus annuus]
JMFN019O21Sequence623013630 (24)ref|XP_011090823.1|1e-120PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r
JMSF001J09Sequence476007440 (23)gb|ACF17656.1|3e-75putative glutamine synthase 2 [Capsicum annuum]763013630 (24)ref|XP_010450398.1|3e-99PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMSF004P17Sequence254007440 (23)ref|XP_009629915.1|6e-20PREDICTED: glutamine synthetase, chloroplastic [Nicotiana tomentosiformis] gb|AA231013630 (24)
JMSF008D06Sequence326007440 (23)ref|NP_001275177.1|1e-30glutamine synthetase, chloroplastic-like [Solanum tuberosum] gb|AAG40236.2| plas774013630 (24)ref|XP_011090823.1|3e-102PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r
JMSF014B04Sequence275007440 (23)801013630 (24)ref|NP_001284439.1|3e-62glutamine synthetase leaf isozyme, chloroplastic [Cucumis melo] gb|AAX35343.1| g
JMSF014L01Sequence493007440 (23)gb|ACF17656.1|5e-68putative glutamine synthase 2 [Capsicum annuum]805013630 (24)ref|XP_011090823.1|3e-121PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r
JMSF016A18Sequence231007440 (23)ref|NP_001275177.1|2e-15glutamine synthetase, chloroplastic-like [Solanum tuberosum] gb|AAG40236.2| plas785013630 (24)ref|XP_011090823.1|5e-126PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r
JMSF017E13Sequence586007440 (23)gb|ACF17656.1|2e-101putative glutamine synthase 2 [Capsicum annuum]762013630 (24)gb|AAB61302.1|5e-98chloroplastic glutamine synthetase [Helianthus annuus]
JMSF021C23Sequence644007440 (23)gb|ACF17656.1|1e-116putative glutamine synthase 2 [Capsicum annuum]744013630 (24)gb|AAB61302.1|4e-98chloroplastic glutamine synthetase [Helianthus annuus]
JMSF022O23Sequence689007440 (23)gb|ACF17656.1|5e-127putative glutamine synthase 2 [Capsicum annuum]749013630 (24)ref|XP_010450398.1|2e-99PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMSF024A19Sequence665007440 (23)gb|ACF17656.1|3e-119putative glutamine synthase 2 [Capsicum annuum]740013630 (24)gb|AAB61302.1|5e-95chloroplastic glutamine synthetase [Helianthus annuus]
JMSF032E05Sequence717007440 (23)gb|ACF17656.1|2e-123putative glutamine synthase 2 [Capsicum annuum]721013630 (24)gb|AAB61302.1|7e-94chloroplastic glutamine synthetase [Helianthus annuus]
JMSF032G17Sequence693007440 (23)gb|ACF17656.1|1e-127putative glutamine synthase 2 [Capsicum annuum]753013630 (24)gb|AAB61302.1|2e-91chloroplastic glutamine synthetase [Helianthus annuus]
JMSF034J03Sequence671007440 (23)gb|ACF17656.1|5e-123putative glutamine synthase 2 [Capsicum annuum]738013630 (24)gb|AAB61302.1|3e-94chloroplastic glutamine synthetase [Helianthus annuus]
JMSF036J10Sequence715013630 (24)ref|XP_011090823.1|1e-101PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r
JMSF041L18Sequence748007440 (23)gb|ACF17656.1|1e-126putative glutamine synthase 2 [Capsicum annuum]756013630 (24)ref|XP_010450398.1|3e-100PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMSF042M18Sequence754007440 (23)gb|ACF17656.1|2e-133putative glutamine synthase 2 [Capsicum annuum]757013630 (24)gb|AAB61302.1|4e-92chloroplastic glutamine synthetase [Helianthus annuus]
JMSF048H13Sequence707007440 (23)gb|ACF17656.1|7e-131putative glutamine synthase 2 [Capsicum annuum]769013630 (24)ref|XP_010450398.1|7e-103PREDICTED: glutamine synthetase, chloroplastic/mitochondrial-like [Camelina sat
JMSF049J17Sequence684007440 (23)gb|ACF17656.1|6e-125putative glutamine synthase 2 [Capsicum annuum]785013630 (24)gb|AAB61302.1|5e-98chloroplastic glutamine synthetase [Helianthus annuus]
JMSF050M11Sequence700007440 (23)gb|ACF17656.1|4e-124putative glutamine synthase 2 [Capsicum annuum]786013630 (24)gb|AAB61302.1|1e-98chloroplastic glutamine synthetase [Helianthus annuus]
JMSF050M18Sequence670007440 (23)gb|ACF17656.1|5e-123putative glutamine synthase 2 [Capsicum annuum]784013630 (24)ref|XP_011090823.1|2e-128PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum] r

Contig 7440 BLAST Hits against nr-aa DB Show

Contig 13630 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007440============================================ 927         ============================================Contig013630============================================ 880
  33 --------------------------------------------------------------->JMFF038E22                                                    <----------------------------------------------------------------------------------rJMFF038E22  
  77       ----------------------------->JMSF014B04                                                                                                  <-----------------------------------------------------------------rJMSF014B04  
 150                --------------------------------------------------------------------------------->JMSF042M18                     <-----------------------------------------------------------------------------------rJMSF042M18  
 166                  -------------------------------------------------------------------------->JMSF050M11                     <----------------------------------------------------------------------------------------rJMSF050M11  
 173                  ---------------------------------->JMSF008D06                                                             <---------------------------------------------------------------------------------------rJMSF008D06  
 185                    -------------------------------------------------------------->JMSF017E13                                  <-------------------------------------------------------------------------------------rJMSF017E13  
 185                    ------------------------------------------------------------------------->JMSF049J17                       <-------------------------------------------------------------------------------------rJMSF049J17  
 190                    ------------------------------------------------------>JMFF012N07                                        <---------------------------------------------------------------------------------------rJMFF012N07  
 194                    -------------------------------------------------------------------------->JMSF032G17                     <-------------------------------------------------------------------------------------rJMSF032G17  
 200                     --------------------------------------------------->JMSF001J09                                           <-------------------------------------------------------------------------------------rJMSF001J09  
 201                     ------------------------------------------------------------------------------->JMSF041L18               <-------------------------------------------------------------------------------------rJMSF041L18  
 206                     -------------------------------------------------------------------->JMSF021C23                          <------------------------------------------------------------------------------------rJMSF021C23  
 206                ----------------------------------------------------->JMSF014L01                                    <-----------------------------------------------------------------------------------------rJMSF014L01  
 208                     ---------------------------------------------------------------------->JMSF024A19                         <-----------------------------------------------------------------------------------rJMSF024A19  
 211                    -------------------------->JMSF004P17                                                                                                                                 <-----------------------rJMSF004P17  
 211                    ----------------------------------------------------------------------->JMSF034J03                         <----------------------------------------------------------------------------------rJMSF034J03  
 211                    ------------------------------------------------------------------------->JMSF022O23                      <-----------------------------------------------------------------------------------rJMSF022O23  
 225                    ---------------------------------------------------------------------------->JMSF032E05                     <--------------------------------------------------------------------------------rJMSF032E05  
 235                         --------------------------------------------------------------------------->JMSF048H13              <--------------------------------------------------------------------------------------rJMSF048H13  
 248                            ----------------------------------------------------------------->JMFF008F23                      <---------------------------------------------------------------------------------------rJMFF008F23  
 276                    ----------------------------------------------------------------------->JMSF050M18            <----------------------------------------------------------------------------------------rJMSF050M18  
 284                    ------------------------>JMSF016A18                                                           <---------------------------------------------------------------------------------------rJMSF016A18  
                     --------------------------------------------------->JMFF018J02-                                  
                                                                                                                         ---------------------------------------------------------------------->JMFN019O21-  
                                                                                                                                <--------------------------------------------------------------------------------rJMSF036J10-