List of clones in pair P000010.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F20Sequence603010151 (31)gb|KJB83376.1|4e-113hypothetical protein B456_013G244600 [Gossypium raimondii]757008376 (36)ref|XP_008384431.1|3e-109PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF006A14Sequence532010151 (31)emb|CDY35861.1|1e-91BnaC09g37930D [Brassica napus]745008376 (36)ref|XP_008384431.1|5e-100PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF006A22Sequence508010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]752008376 (36)ref|XP_008384431.1|1e-108PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF008O15Sequence630010151 (31)ref|XP_010531152.1|2e-109PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]757008376 (36)gb|AAT09064.1|1e-79alpha tubulin 2 [Bigelowiella natans]
JMFF009A16Sequence506010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]735008376 (36)ref|XP_008384431.1|9e-121PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF010F23Sequence786008376 (36)ref|XP_008384431.1|9e-119PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF011I08Sequence501010151 (31)ref|XP_010535935.1|5e-68PREDICTED: tubulin alpha-3 chain-like isoform X2 [Tarenaya hassleriana]758008376 (36)ref|XP_008384431.1|1e-99PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF018H16Sequence507010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]734008376 (36)ref|XP_008384431.1|9e-121PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF020L06Sequence510010151 (31)emb|CDY35861.1|4e-94BnaC09g37930D [Brassica napus]657008376 (36)ref|XP_008384431.1|7e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF022J21Sequence504010151 (31)ref|XP_010531152.1|1e-94PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]788008376 (36)ref|XP_008384431.1|1e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF023A08Sequence480010151 (31)emb|CDY35861.1|5e-91BnaC09g37930D [Brassica napus]737008376 (36)ref|XP_008384431.1|2e-120PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF024A16Sequence630008376 (36)ref|XP_008384431.1|5e-96PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF026N08Sequence582010151 (31)ref|XP_010531152.1|2e-97PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]779008376 (36)ref|XP_008384431.1|2e-114PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF028P08Sequence573008376 (36)ref|XP_008384431.1|2e-72PREDICTED: tubulin alpha-3 chain-like [Malus domestica]647008376 (36)ref|XP_008384431.1|3e-70PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF030F16Sequence520010151 (31)gb|KJB83376.1|8e-96hypothetical protein B456_013G244600 [Gossypium raimondii]689008376 (36)ref|XP_008384431.1|2e-93PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF030J21Sequence478010151 (31)emb|CDY35861.1|2e-91BnaC09g37930D [Brassica napus]715008376 (36)ref|XP_008384431.1|6e-120PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF032B23Sequence506010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]779008376 (36)ref|XP_008384431.1|4e-115PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF033K04Sequence505010151 (31)ref|XP_010531152.1|5e-94PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]783008376 (36)ref|XP_008384431.1|2e-119PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF035F23Sequence466010151 (31)gb|KJB83376.1|1e-95hypothetical protein B456_013G244600 [Gossypium raimondii]761008376 (36)ref|XP_008384431.1|1e-101PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF035K15Sequence588010151 (31)gb|KJB83376.1|3e-110hypothetical protein B456_013G244600 [Gossypium raimondii]715008376 (36)gb|AHZ58481.1|6e-88alpha-tubulin, partial [Syntrichia caninervis]
JMFF037D22Sequence508010151 (31)emb|CDY35861.1|2e-93BnaC09g37930D [Brassica napus]
JMFF038C06Sequence525010151 (31)ref|XP_010531152.1|1e-99PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]
JMFF042B13Sequence627010151 (31)ref|XP_010531152.1|4e-110PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]642008376 (36)ref|XP_008384431.1|8e-94PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF042E02Sequence659010151 (31)ref|XP_010531152.1|3e-118PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]589008376 (36)ref|XP_008384431.1|6e-60PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF042E19Sequence648010151 (31)emb|CBI16534.3|1e-115unnamed protein product [Vitis vinifera]608008376 (36)ref|XP_008384431.1|1e-64PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF043K15Sequence633010151 (31)ref|XP_010531152.1|3e-111PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]638008376 (36)ref|XP_008384431.1|5e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF045A22Sequence633010151 (31)ref|XP_010531152.1|5e-106PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]611008376 (36)ref|XP_008384431.1|4e-69PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF047L19Sequence608010151 (31)ref|XP_010531152.1|9e-99PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]
JMFF048J22Sequence468010151 (31)emb|CDY35861.1|9e-83BnaC09g37930D [Brassica napus]448008376 (36)ref|XP_010414865.1|3e-13PREDICTED: tubulin alpha-1 chain [Camelina sativa]
JMFN009F06Sequence606008376 (36)ref|XP_008384431.1|7e-137PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN034K02Sequence607008376 (36)ref|XP_008384431.1|7e-137PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN041D03Sequence640010151 (31)gb|KJB83376.1|2e-119hypothetical protein B456_013G244600 [Gossypium raimondii]
JMFN043N18Sequence485008376 (36)gb|AAD50629.1|AF106571_17e-32alpha-tubulin [Gossypium hirsutum]
JMFS070G12Sequence627010151 (31)ref|XP_010531152.1|4e-97PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]
JMSF014G09Sequence531010151 (31)ref|XP_010531152.1|4e-101PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]767008376 (36)ref|XP_008384431.1|2e-114PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF018K20Sequence481008376 (36)gb|AAP34367.1|6e-56alpha-tubulin [Gossypium barbadense]562008376 (36)gb|AAP34367.1|1e-55alpha-tubulin [Gossypium barbadense]
JMSF031J04Sequence630010151 (31)ref|XP_010531152.1|1e-110PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]786008376 (36)ref|XP_008384431.1|1e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF042N04Sequence732010151 (31)ref|XP_010531152.1|3e-137PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]659008376 (36)ref|XP_008384431.1|2e-94PREDICTED: tubulin alpha-3 chain-like [Malus domestica]

Contig 10151 BLAST Hits against nr-aa DB Show

Contig 8376 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010151============================================ 778         ============================================Contig008376============================================1017
  28    ----------------------------------------------------------->JMFF048J22                                                                                                <-------------------------------------------rJMFF048J22  
  73 ------------------------------------------------------------------>JMFF006A14                                                        <------------------------------------------------------------------------rJMFF006A14  
  78    -------------------------------------------------------------------------------->JMFF045A22                                                      <-----------------------------------------------------------rJMFF045A22  
  87       ---------------------------------------------------------------------------------->JMFF042E19                                                  <-----------------------------------------------------------rJMFF042E19  
  87       ------------------------------------------------------------------------------------>JMFF042E02                                                  <---------------------------------------------------------rJMFF042E02  
  87    --------------------------------------------------------------->JMFF011I08                                                         <------------------------------------------------------------------------rJMFF011I08  
 105       ---------------------------------------------------------------->JMFF022J21                                                <-----------------------------------------------------------------------------rJMFF022J21  
 106       ---------------------------------------------------------------->JMFF006A22                                                   <--------------------------------------------------------------------------rJMFF006A22  
 106       ---------------------------------------------------------------->JMFF032B23                                                 <----------------------------------------------------------------------------rJMFF032B23  
 106       -------------------------------------------------------------------------------->JMFF008O15                                   <--------------------------------------------------------------------------rJMFF008O15  
 107       ----------------------------------------------------------------->JMFF020L06                                                            <----------------------------------------------------------------rJMFF020L06  
 117       ------------------------------------------------------------------->JMSF014G09                                              <---------------------------------------------------------------------------rJMSF014G09  
 119       ---------------------------------------------------------------->JMFF033K04                                               <-----------------------------------------------------------------------------rJMFF033K04  
 121       -------------------------------------------------------------------------------->JMSF031J04                                <----------------------------------------------------------------------------rJMSF031J04  
 142            ----------------------------------------------------------------------------->JMFF002F20                                 <--------------------------------------------------------------------------rJMFF002F20  
 146            ----------------------------------------------------------->JMFF035F23                                                   <--------------------------------------------------------------------------rJMFF035F23  
 153             -------------------------------------------------------------------------->JMFF026N08                                 <----------------------------------------------------------------------------rJMFF026N08  
 153       -------------------------------------------------------------------------------->JMFF043K15                                              <-----------------------------------------------------------rJMFF043K15  
 157             ------------------------------------------------------------------>JMFF030F16                                                  <-------------------------------------------------------------------rJMFF030F16  
 159            --------------------------------------------------------------------------->JMFF035K15                                       <---------------------------------------------------------------------rJMFF035K15  
 166       --------------------------------------------------------------------------------------------->JMSF042N04                            <--------------------------------------------------------------rJMSF042N04  
 169       ------------------------------------------------------------->JMFF023A08                                                  <------------------------------------------------------------------------rJMFF023A08  
 170       ---------------------------------------------------------------->JMFF018H16                                               <------------------------------------------------------------------------rJMFF018H16  
 175       ---------------------------------------------------------------->JMFF009A16                                               <-----------------------------------------------------------------------rJMFF009A16  
 178       -------------------------------------------------------------------------------->JMFF042B13                                          <------------------------------------------------------------rJMFF042B13  
 187       ------------------------------------------------------------>JMFF030J21                                                   <----------------------------------------------------------------------rJMFF030J21  
           -------------------------------------------------------------->JMFF037D22-                                 
                  -------------------------------------------------------------------------------->JMFS070G12-        
        ----------------------------------------------------------------------------->JMFF047L19-                     
              --------------------------------------------------------------------------------->JMFN041D03-           
           ------------------------------------------------------------------->JMFF038C06-                            
                                                                                                                                                                      ----------------------------------------------->JMFN043N18-  
                                                                                                                                               <-------------------------------------------------------------rJMFF024A16- 
                                                                                                                      ----------------------------------------------------------->JMFN034K02-  
                                                                                                                                                    <------------------------------------------------------------rJMSF030E11* 
                                                                                                                      ----------------------------------------------------------->JMFN009F06-  
                                                                                                                                      <----------------------------------------------------------------------------rJMFF010F23- 
                                                                                                                                                        <------------------------------------------------------------rJMFF028P08**
                                                                                                                                                              <----------------------------------------------------rJMSF018K20**
                                                                                                                                                       -------------------------------------------------------->JMFF028P08**
                                                                                                                                                              -------------------------------------------->JMSF018K20**