Contig 008376:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002F20Sequence603010151 (31)gb|KJB83376.1|4e-113hypothetical protein B456_013G244600 [Gossypium raimondii]757008376 (36)ref|XP_008384431.1|3e-109PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF006A14Sequence532010151 (31)emb|CDY35861.1|1e-91BnaC09g37930D [Brassica napus]745008376 (36)ref|XP_008384431.1|5e-100PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF006A22Sequence508010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]752008376 (36)ref|XP_008384431.1|1e-108PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF008O15Sequence630010151 (31)ref|XP_010531152.1|2e-109PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]757008376 (36)gb|AAT09064.1|1e-79alpha tubulin 2 [Bigelowiella natans]
JMFF009A16Sequence506010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]735008376 (36)ref|XP_008384431.1|9e-121PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF010F23Sequence786008376 (36)ref|XP_008384431.1|9e-119PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF011I08Sequence501010151 (31)ref|XP_010535935.1|5e-68PREDICTED: tubulin alpha-3 chain-like isoform X2 [Tarenaya hassleriana]758008376 (36)ref|XP_008384431.1|1e-99PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF018H16Sequence507010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]734008376 (36)ref|XP_008384431.1|9e-121PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF020L06Sequence510010151 (31)emb|CDY35861.1|4e-94BnaC09g37930D [Brassica napus]657008376 (36)ref|XP_008384431.1|7e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF022J21Sequence504010151 (31)ref|XP_010531152.1|1e-94PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]788008376 (36)ref|XP_008384431.1|1e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF023A08Sequence480010151 (31)emb|CDY35861.1|5e-91BnaC09g37930D [Brassica napus]737008376 (36)ref|XP_008384431.1|2e-120PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF024A16Sequence630008376 (36)ref|XP_008384431.1|5e-96PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF026N08Sequence582010151 (31)ref|XP_010531152.1|2e-97PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]779008376 (36)ref|XP_008384431.1|2e-114PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF028P08Sequence573008376 (36)ref|XP_008384431.1|2e-72PREDICTED: tubulin alpha-3 chain-like [Malus domestica]647008376 (36)ref|XP_008384431.1|3e-70PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF030F16Sequence520010151 (31)gb|KJB83376.1|8e-96hypothetical protein B456_013G244600 [Gossypium raimondii]689008376 (36)ref|XP_008384431.1|2e-93PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF030J21Sequence478010151 (31)emb|CDY35861.1|2e-91BnaC09g37930D [Brassica napus]715008376 (36)ref|XP_008384431.1|6e-120PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF032B23Sequence506010151 (31)emb|CBI16534.3|2e-95unnamed protein product [Vitis vinifera]779008376 (36)ref|XP_008384431.1|4e-115PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF033K04Sequence505010151 (31)ref|XP_010531152.1|5e-94PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]783008376 (36)ref|XP_008384431.1|2e-119PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF035F23Sequence466010151 (31)gb|KJB83376.1|1e-95hypothetical protein B456_013G244600 [Gossypium raimondii]761008376 (36)ref|XP_008384431.1|1e-101PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF035K15Sequence588010151 (31)gb|KJB83376.1|3e-110hypothetical protein B456_013G244600 [Gossypium raimondii]715008376 (36)gb|AHZ58481.1|6e-88alpha-tubulin, partial [Syntrichia caninervis]
JMFF042B13Sequence627010151 (31)ref|XP_010531152.1|4e-110PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]642008376 (36)ref|XP_008384431.1|8e-94PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF042E02Sequence659010151 (31)ref|XP_010531152.1|3e-118PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]589008376 (36)ref|XP_008384431.1|6e-60PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF042E19Sequence648010151 (31)emb|CBI16534.3|1e-115unnamed protein product [Vitis vinifera]608008376 (36)ref|XP_008384431.1|1e-64PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF043K15Sequence633010151 (31)ref|XP_010531152.1|3e-111PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]638008376 (36)ref|XP_008384431.1|5e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF045A22Sequence633010151 (31)ref|XP_010531152.1|5e-106PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]611008376 (36)ref|XP_008384431.1|4e-69PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF048J22Sequence468010151 (31)emb|CDY35861.1|9e-83BnaC09g37930D [Brassica napus]448008376 (36)ref|XP_010414865.1|3e-13PREDICTED: tubulin alpha-1 chain [Camelina sativa]
JMFN009F06Sequence606008376 (36)ref|XP_008384431.1|7e-137PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN034K02Sequence607008376 (36)ref|XP_008384431.1|7e-137PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN043N18Sequence485008376 (36)gb|AAD50629.1|AF106571_17e-32alpha-tubulin [Gossypium hirsutum]
JMSF014G09Sequence531010151 (31)ref|XP_010531152.1|4e-101PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]767008376 (36)ref|XP_008384431.1|2e-114PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF018K20Sequence481008376 (36)gb|AAP34367.1|6e-56alpha-tubulin [Gossypium barbadense]562008376 (36)gb|AAP34367.1|1e-55alpha-tubulin [Gossypium barbadense]
JMSF030E11Sequence501010758 (4)ref|XP_004245231.1|1e-08PREDICTED: MLO-like protein 9 [Solanum lycopersicum]617008376 (36)ref|XP_008384431.1|2e-85PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF031J04Sequence630010151 (31)ref|XP_010531152.1|1e-110PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]786008376 (36)ref|XP_008384431.1|1e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF042N04Sequence732010151 (31)ref|XP_010531152.1|3e-137PREDICTED: tubulin alpha-3 chain [Tarenaya hassleriana]659008376 (36)ref|XP_008384431.1|2e-94PREDICTED: tubulin alpha-3 chain-like [Malus domestica]

Alignment

This contig is upended


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JMFN034K02-              CATCTGTAGGAGGTCCCTAGATGTTGAGAGGCCAACCTATACTAATTTGAACAGGCT
JMFN009F06-               ATCTGTAGGAGGTCCCTAGATGTTGAGAGGCCAACCTATACTAATTTGAACAGGCT
                      ____________________________________________________________
consensus                CATCTGTAGGAGGTCCCTAGATGTTGAGAGGCCAACCTATACTAATTTGAACAGGCT
 
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JMFN034K02-           AATTTCTCAAATCATATCATCCCTGACCACCTCATTAAGGTTTGATGGAGCCATAAATGT
JMFN009F06-           AATTTCTCAAATCATATCATCCCTGACCACCTCATTAAGGTTTGATGGAGCCATAAATGT
                      ____________________________________________________________
consensus             AATTTCTCAAATCATATCATCCCTGACCACCTCATTAAGGTTTGATGGAGCCATAAATGT
 
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JMFN034K02-           GGACATGACAGAGTTCCAAACCAACCTTGTACCCTATCCCCGTATACATTTCATGCTTTC
JMFN009F06-           GGACATGACAGAGTTCCAAACCAACCTTGTACCCTATCCCCGTATACATTTCATGCTTTC
rJMFF030J21+                                                   GTATACATTTCATGCTTTC
rJMFF009A16+                                                  CGTATACATTTCATGCTTTC
rJMFF018H16+                                                  CGTATACATTTCATGCTTTC
rJMFF023A08+                                                   GTATACATTTCATGCTTTC
rJMSF031J04+                                                           TTCATGCTTTC
rJMFF033K04+                                                   GTATACATTTCATGCTTTC
rJMSF014G09+                                                                     C
rJMFF010F23+                                                        CATTTCATGCTTTC
rJMFF032B23+                                                                   TTC
rJMFF026N08+                                                                   TTC
rJMFF022J21+                                                           TTCATGCTTTC
                      ____________________________________________________________
consensus             GGACATGACAGAGTTCCAAACCAACCTTGTACCCTATCCCCGTATACATTTCATGCTTTC
 
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JMFN034K02-           TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
JMFN009F06-           TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF030J21+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF009A16+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF018H16+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF023A08+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMSF031J04+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF033K04+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMSF014G09+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF010F23+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF032B23+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF026N08+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF002F20+                             TCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF006A22+                                  TGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF011I08+                                              CCATGAGCAGCTTTCTGTCCCGGG
rJMFF006A14+                                        GGCATACCATGAGCAGCTTTCTGTCCCCGG
rJMFF035F23+                          ATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGTCCCCGG
rJMFF008O15+                              CAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
rJMFF022J21+          TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
                      ____________________________________________________________
consensus             TTCATATGCTCCTGTGATCTCAGCTGCCAAGGCATACCATGAGCAGCTTTCTGT-CCCGG
 
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JMFN034K02-           AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
JMFN009F06-           AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF030J21+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF024A16+                           TTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF042B13+                                       AGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF009A16+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF018H16+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF023A08+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMSF031J04+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF033K04+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMSF014G09+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF010F23+          AGATTACAAGTGCTGTCTTTGAGCCNTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF032B23+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF030F16+                                  CCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF026N08+          AGATTACAAGTGCTGTCTTTGAGCCNTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF002F20+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF006A22+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAGTGTGA-CCCCAGGCAC
rJMFF011I08+          AGATTNCAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF006A14+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF035F23+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF008O15+          AGATTACAAGTGCTGTCTTTGAGCCNTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF035K15+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGACCCCCAGGCAC
rJMSF042N04+                                    TCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
rJMFF022J21+          AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
                      ____________________________________________________________
consensus             AGATTACAAGTGCTGTCTTTGAGCCCTCAAGCATGATGGCAAAATGTGA-CCCCAGGCAC
 
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JMFN034K02-           GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
JMFN009F06-           GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF030J21+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF024A16+          GGGAAATACATGGCTTGCTGCTTGATGTNCCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF042B13+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF009A16+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF018H16+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF023A08+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMSF031J04+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF033K04+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMSF014G09+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF010F23+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF032B23+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF030F16+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF026N08+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF002F20+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF006A22+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF011I08+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF006A14+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF035F23+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF008O15+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMSF030E11+                      GCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
JMFF028P08-                                                      TTCCTAAGGATGTCAAT
rJMFF035K15+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF020L06+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMSF042N04+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF043K15+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF022J21+          GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
rJMFF045A22+                                                                 TCAAT
rJMFF028P08+                                                            GGATGTCAAT
                      ____________________________________________________________
consensus             GGGAAATACATGGCTTGCTGCTTGATGTACCGAGGGGATGTTGTTCCTAAGGATGTCAAT
 
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JMFN034K02-           GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
JMFN009F06-           GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF030J21+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF024A16+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF042B13+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF009A16+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF018H16+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF023A08+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMSF031J04+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF033K04+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMSF018K20+                                                           GGTGCCCAACC
rJMSF014G09+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF010F23+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF032B23+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF030F16+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF026N08+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF002F20+          GCTGCTTTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF006A22+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF011I08+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF006A14+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF035F23+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF008O15+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMSF030E11+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
JMFF028P08-           GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
JMSF018K20-                                                            GGTGCCCAACC
rJMFF035K15+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF020L06+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMSF042N04+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF043K15+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF022J21+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF045A22+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF028P08+          GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF042E02+                                         CAGTTCAGTTTGTTGACTGGTGCCCAACC
rJMFF042E19+                        TATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
                      ____________________________________________________________
consensus             GCTGCTGTTGCCACTATCAAAACGAAACGCACAGTTCAGTTTGTTGACTGGTGCCCAACC
 
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JMFN034K02-           GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
JMFN009F06-           GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF030J21+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF024A16+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF042B13+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF009A16+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF018H16+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF023A08+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMSF031J04+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF033K04+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMSF018K20+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMSF014G09+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF010F23+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF032B23+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF030F16+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF026N08+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF002F20+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF006A22+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF011I08+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF006A14+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF035F23+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF008O15+          GGCTTCAAATGTGGGATTAACTACCAACCCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMSF030E11+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
JMFF028P08-           GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
JMSF018K20-           GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF035K15+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF020L06+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMSF042N04+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF043K15+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF022J21+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF045A22+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF028P08+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF042E02+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
rJMFF042E19+          GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
                      ____________________________________________________________
consensus             GGCTTCAAATGTGGGATTAACTACCAA-CCCCCAACAGTTGTGCCCGGGGGTGATCTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034K02-           CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
JMFN009F06-           CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF030J21+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF024A16+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF042B13+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF009A16+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF018H16+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF023A08+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMSF031J04+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF033K04+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMSF018K20+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMSF014G09+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF010F23+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF032B23+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF030F16+          CGAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF026N08+          CGAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF002F20+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF006A22+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF011I08+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF006A14+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF035F23+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF008O15+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMSF030E11+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
JMFF028P08-           CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
JMSF018K20-           CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF035K15+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF020L06+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMSF042N04+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF043K15+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF022J21+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF045A22+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF028P08+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
JMFN043N18-                         CTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF042E02+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
rJMFF042E19+          CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
                      ____________________________________________________________
consensus             CAAGGTGCAGAGAGCTGTTTGTATGATCAGCAACAACACTGCTGTGGCCGAGGTGTTCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034K02-           ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
JMFN009F06-           ACGCATTGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF030J21+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF024A16+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF042B13+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF009A16+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF018H16+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF023A08+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMSF031J04+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF033K04+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMSF018K20+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMSF014G09+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF010F23+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF032B23+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF030F16+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF026N08+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF002F20+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF006A22+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF011I08+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF006A14+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF035F23+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF008O15+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMSF030E11+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
JMFF028P08-           ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
JMSF018K20-           ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF035K15+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF020L06+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMSF042N04+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF043K15+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF022J21+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF045A22+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF028P08+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
JMFN043N18-           ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF042E02+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF042E19+          ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
rJMFF048J22+                                        TTCCAAGAGGGCGTTCGTTCACTGGTATGT
                      ____________________________________________________________
consensus             ACGCATCGACCACAAGTTTGATCTCATGTATTCCAAGAGGGCGTTCGTTCACTGGTATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN034K02-           AGGTGAAGGCATG                                               
JMFN009F06-           AGGTGAAGGCATG                                               
rJMFF030J21+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF024A16+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF042B13+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF009A16+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF018H16+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF023A08+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMSF031J04+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF033K04+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMSF018K20+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMSF014G09+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF010F23+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF032B23+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF030F16+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF026N08+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF002F20+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF006A22+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF011I08+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF006A14+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF035F23+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF008O15+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMSF030E11+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
JMFF028P08-           AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
JMSF018K20-           AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF035K15+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF020L06+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMSF042N04+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF043K15+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF022J21+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF045A22+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF028P08+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
JMFN043N18-           AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF042E02+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF042E19+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
rJMFF048J22+          AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
                      ____________________________________________________________
consensus             AGGTGAAGGCATGGAAGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTAGCTGCCCTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030J21+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF024A16+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF042B13+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF009A16+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF018H16+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF023A08+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMSF031J04+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF033K04+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMSF018K20+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMSF014G09+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF010F23+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF032B23+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF030F16+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF026N08+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF002F20+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF006A22+          GAAAGATTACGAAGAATTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF011I08+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF006A14+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAATATGATGAAGGAGAAGACTA
rJMFF035F23+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF008O15+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMSF030E11+          GAAAGATTACGAAGAAGTTGGTGCT-AAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
JMFF028P08-           GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
JMSF018K20-           GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF035K15+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF020L06+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMSF042N04+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF043K15+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF022J21+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF045A22+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF028P08+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
JMFN043N18-           GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF042E02+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF042E19+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
rJMFF048J22+          GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
                      ____________________________________________________________
consensus             GAAAGATTACGAAGAAGTTGGTGCTGAAGGTGTCGAAGAAGATGATGAAGGAGAAGACTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030J21+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF024A16+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF042B13+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF009A16+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF018H16+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF023A08+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMSF031J04+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF033K04+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMSF018K20+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMSF014G09+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF010F23+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF032B23+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF030F16+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF026N08+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF002F20+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF006A22+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF011I08+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF006A14+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF035F23+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF008O15+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMSF030E11+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
JMFF028P08-           TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
JMSF018K20-           TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF035K15+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF020L06+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMSF042N04+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF043K15+          TTGAAGTGTGGCATCTCGTGTTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF022J21+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF045A22+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF028P08+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
JMFN043N18-           TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF042E02+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF042E19+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
rJMFF048J22+          TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
                      ____________________________________________________________
consensus             TTGAAGTGTGGCATCTCGT-CTAGGCAGGCTGCTGCCCTGAGCTTCAGCCATTAGCCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030J21+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF024A16+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF042B13+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF009A16+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF018H16+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF023A08+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMSF031J04+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF033K04+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMSF018K20+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMSF014G09+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF010F23+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF032B23+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF030F16+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF026N08+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF002F20+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF006A22+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF011I08+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF006A14+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF035F23+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF008O15+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMSF030E11+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
JMFF028P08-           TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
JMSF018K20-           TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF035K15+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF020L06+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMSF042N04+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF043K15+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF022J21+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF045A22+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF028P08+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
JMFN043N18-           TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF042E02+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF042E19+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
rJMFF048J22+          TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
                      ____________________________________________________________
consensus             TGCTATATATTCCGTATCTATTTCTTTCTTGGTATATTGTTAAAGTGTTGTTGTGTGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030J21+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGT                   
rJMFF024A16+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAAT         
rJMFF042B13+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAA          
rJMFF009A16+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTC       
rJMFF018H16+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTC  
rJMFF023A08+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCT 
rJMSF031J04+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF033K04+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMSF018K20+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMSF014G09+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF010F23+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF032B23+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF030F16+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF026N08+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF002F20+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF006A22+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF011I08+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF006A14+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF035F23+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF008O15+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMSF030E11+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
JMFF028P08-           AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
JMSF018K20-           AGCTTTTGGTTGATGTTGAAATCTGTTG                                
rJMFF035K15+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF020L06+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMSF042N04+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTATNCAGTGTTGCTTCTAATTCAAGTCTT
rJMFF043K15+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF022J21+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF045A22+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF028P08+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
JMFN043N18-           AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF042E02+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF042E19+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
rJMFF048J22+          AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
                      ____________________________________________________________
consensus             AGCTTTTGGTTGATGTTGAAATCTGTTGTTTTAT-CAGTGTTGCTTCTAATTCAAGTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF031J04+          TAAGAAGTGCCTGCATACCAGTGGTTACCAATTTTCATGTAAACTCAT            
rJMFF033K04+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTG          
rJMSF018K20+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTGA         
rJMSF014G09+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTGA         
rJMFF010F23+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTGA         
rJMFF032B23+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF030F16+          TAAGAAGTGCCTGCATA-CAGTGGTTGCCAATTTTCATGTAAACTCATTTGATTAAGC  
rJMFF026N08+          TAAGAAGTGCCTGCATA-CAGTGGTTGCCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF002F20+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF006A22+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF011I08+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF006A14+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATT           
rJMFF035F23+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF008O15+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMSF030E11+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATT                           
JMFF028P08-           TAANAAGTGCCTGCATA-CA                                        
rJMFF035K15+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATT           
rJMFF020L06+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMSF042N04+          TAA                                                         
rJMFF043K15+          TAAGAAGTGCCTGCA                                             
rJMFF022J21+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF045A22+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF028P08+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
JMFN043N18-           TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF042E02+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF042E19+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
rJMFF048J22+          TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
                      ____________________________________________________________
consensus             TAAGAAGTGCCTGCATA-CAGTGGTTACCAATTTTCATGTAAACTCATTTGATTAAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF032B23+          AT                                                          
rJMFF026N08+          AT                                                          
rJMFF002F20+          AT                                                          
rJMFF006A22+          AT                                                          
rJMFF011I08+          A                                                           
rJMFF035F23+          AT                                                          
rJMFF008O15+          AT                                                          
rJMFF020L06+          A                                                           
rJMFF022J21+          ATT                                                         
rJMFF045A22+          ATTTTAGTTT                                                  
rJMFF028P08+          ATTTTAGTTT                                                  
JMFN043N18-           ATTTTAGTTTAATTGGTTTAA                                       
rJMFF042E02+          ATTTTAGTTTAATTGGTTTAA                                       
rJMFF042E19+          ATTTTAGTTTAATTGGTTTAA                                       
rJMFF048J22+          ATTTTAGTTTXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGGTCCGCCATAAGG
                      ____________________________________________________________
consensus             ATTTTAGTTTAATTGGTTTAANNNNNNNNNNNNNNCTCTCCAGGGTGGTCCGCCATAAGG