Contig 014082:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H06Sequence583000974 (6)ref|XP_009613825.1|4e-35PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana781014082 (5)ref|XP_009613825.1|3e-134PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF030D11Sequence654000974 (6)ref|XP_009761601.1|3e-40PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana727014082 (5)ref|XP_009613825.1|7e-125PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF032J22Sequence711024216ref|XP_009791008.1|2e-141PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana722014082 (5)ref|XP_009613825.1|2e-93PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF042K14Sequence780000974 (6)ref|XP_009761601.1|6e-55PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana830014082 (5)ref|XP_009613825.1|1e-122PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana
JMSF048I07Sequence676000974 (6)ref|XP_009613825.1|3e-34PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana740014082 (5)ref|XP_009613825.1|3e-105PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016H06+ GAAGATTCAGCTGGAACNTGCTCGGGCAGCAGTTAGCGATGATCCCTTTGTCGGC
                      ____________________________________________________________
consensus GAAGATTCAGCTGGAACNTGCTCGGGCAGCAGTTAGCGATGATCCCTTTGTCGGC
 
. : . : . : . : . : . :
rJMSF016H06+ GGTCTTACAAAGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
rJMSF030D11+ AGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
rJMSF042K14+ AGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
                      ____________________________________________________________
consensus GGTCTTACAAAGTCGATGCAAGAGAAGTTTGATAAATACTGGAAGAGCTGTTGCCTAATA
 
. : . : . : . : . : . :
rJMSF016H06+ TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF030D11+ TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF048I07+ CACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
rJMSF042K14+ TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
                      ____________________________________________________________
consensus TTATCAATTGCAGTAATTGTGGATCCACGCTTCAAAATGAAGCTTGTTGAGTTCAGCTTC
 
. : . : . : . : . : . :
rJMSF016H06+ TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF030D11+ TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF032J22+ AAATTTATGGNGAAGATGNCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF048I07+ TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
rJMSF042K14+ TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
                      ____________________________________________________________
consensus TCTAAAATTTATGGTGAAGATGCCTCAACATATGTGAGGATTGTTGATGAGGGAATTCAC
 
. : . : . : . : . : . :
rJMSF016H06+ GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF030D11+ GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF032J22+ GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCNTCTGACCCCGACTTATATTGAAGAA
rJMSF048I07+ GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
rJMSF042K14+ GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
                      ____________________________________________________________
consensus GAGCTCTTCCAGGATTACGTAGCACTTCCCCTGCCTCTGACCCCGACTTATATTGAAGAA
 
. : . : . : . : . : . :
rJMSF016H06+ GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF030D11+ GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF032J22+ GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF048I07+ GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
rJMSF042K14+ GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
                      ____________________________________________________________
consensus GCAAACGGTGGAGCTGTCAACACACAGGATGCTCAAGAGCTTTCTACTAATGAACTCGGA
 
. : . : . : . : . : . :
rJMSF016H06+ CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF030D11+ CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF032J22+ CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF048I07+ CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
rJMSF042K14+ CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
                      ____________________________________________________________
consensus CTCACCGATTTTGATGCCTTCATCATGGAGACTTCAAGCCAGCAGTCTCGGTCTGAATTG
 
. : . : . : . : . : . :
rJMSF016H06+ GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF030D11+ GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF032J22+ GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF048I07+ GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
rJMSF042K14+ GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
                      ____________________________________________________________
consensus GATCAATACTTGGAGGAGTCTTTGTTGCCCCGAGTCCATGAGTTTGACGTTGTAGGCTGG
 
. : . : . : . : . : . :
rJMSF016H06+ TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF030D11+ TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF032J22+ TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF048I07+ TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
rJMSF042K14+ TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
                      ____________________________________________________________
consensus TGGAAACTGAACAGGATGAAGTACCCTACGCTTTCAAAGATGGCTCGTGATATCTTGACC
 
. : . : . : . : . : . :
rJMSF016H06+ GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF030D11+ GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF032J22+ GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF048I07+ GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
rJMSF042K14+ GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
                      ____________________________________________________________
consensus GTCCCAGTATCAACGGCTCCTGCAGACTCAGTGTTTAGCACGGTGCACAAAGAAATGGAC
 
. : . : . : . : . : . :
rJMSF016H06+ CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF030D11+ CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF032J22+ CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF048I07+ CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
rJMSF042K14+ CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
                      ____________________________________________________________
consensus CGTTACAGGTGTTCCTTGCGACCCGAGACCGTGGAGGCCCTTGTGTGCGCTAAGGACTGG
 
. : . : . : . : . : . :
rJMSF016H06+ CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF030D11+ CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF032J22+ CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF048I07+ CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
rJMSF042K14+ CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
                      ____________________________________________________________
consensus CAACAGAATGAATTGGTAAAAAGTATAACAGCACCAATAAAAATGGAGGTCCCCATTTAA
 
. : . : . : . : . : . :
rJMSF016H06+ TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF030D11+ TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF032J22+ TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF048I07+ TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
rJMSF042K14+ TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
                      ____________________________________________________________
consensus TTCAAATCTCTTTGGTATTTTTAGTTGTCTAGGATGGGTTTTATAGTGAGAACTGAATCT
 
. : . : . : . : . : . :
rJMSF016H06+ TCATTT
rJMSF030D11+ TCATTTAGAAT
rJMSF032J22+ TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
rJMSF048I07+ TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
rJMSF042K14+ TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
                      ____________________________________________________________
consensus TCATTTAGAATTGTGTATGCTTATATGTTATATTAGACTTGGCTTTTGTATCATAGAAGT
 
. : . : . : . : . : . :
rJMSF032J22+ TACTGAATCCCTTAGGGTAC
rJMSF048I07+ TACTGAATCCCTTAGGGTAC
rJMSF042K14+ TACTGAATCCCTTAGGGTACATTGACTTGGTAATTACCCCTCTCTGTCTGTCTGATGCTC
                      ____________________________________________________________
consensus TACTGAATCCCTTAGGGTACATTGACTTGGTAATTACCCCTCTCTGTCTGTCTGATGCTC