Contig 013567:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005C13Sequence466013567 (10)ref|NP_001233777.1|8e-43gamma aminobutyrate transaminase 3, chloroplastic [Solanum lycopersicum] sp|Q84P720006978 (9)ref|XP_006357874.1|1e-97PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Solanum tube
JMFF010J06Sequence577013567 (10)ref|XP_009804950.1|1e-67PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest758006978 (9)ref|XP_006357874.1|4e-98PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Solanum tube
JMFF027L09Sequence545013567 (10)ref|XP_009804950.1|2e-60PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest734006978 (9)ref|XP_006357874.1|6e-97PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Solanum tube
JMFF030B19Sequence379013567 (10)ref|XP_010313637.1|2e-19PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic isoform X1 [Solanu697006978 (9)ref|XP_006357874.1|8e-98PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Solanum tube
JMFF047E14Sequence484013567 (10)ref|NP_001233777.1|2e-40gamma aminobutyrate transaminase 3, chloroplastic [Solanum lycopersicum] sp|Q84P418006978 (9)ref|XP_004505667.1|1e-27PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Cicer arieti
JMFS078G08Sequence627013567 (10)ref|XP_009804950.1|4e-109PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest
JMFS163B08Sequence601013567 (10)ref|XP_009804950.1|4e-76PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest
JMSF023B13Sequence474013567 (10)ref|XP_009804950.1|3e-59PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest744006978 (9)ref|XP_009592076.1|3e-118PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana tomento
JMSF034E12Sequence638013567 (10)ref|XP_009804950.1|2e-96PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest
JMSF050C11Sequence648013567 (10)ref|XP_009804950.1|7e-71PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial [Nicotiana sylvest725006978 (9)ref|XP_006357874.1|3e-98PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Solanum tube

Alignment

This contig is upended


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JMFS078G08+                                                         TGATCCATGGTATG
                      ____________________________________________________________
consensus                                                           TGATCCATGGTATG
 
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JMFS078G08+           ATTTTTCACGAGCAATAAATTTTTTCTTGTTTGGTCTCCCAAGTGCATTGTTATAATACC
JMSF034E12+                                          TGGTCTCCCAAGTGCATTGTTATAATACC
                      ____________________________________________________________
consensus             ATTTTTCACGAGCAATAAATTTTTTCTTGTTTGGTCTCCCAAGTGCATTGTTATAATACC
 
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JMFS078G08+           ATACCAACTTCACCTGTGTGTCATTGGCTTCTGATCCACTATTTGTGAAAAATGCTTTTG
JMSF034E12+           ATACCAACTTCACNTGTGTGTCATTGGCTTCTGATCCACTATTTGTGAAAAATGCTTTTG
JMFS163B08+                                                           AAAATGCTTTTG
                      ____________________________________________________________
consensus             ATACCAACTTCACCTGTGTGTCATTGGCTTCTGATCCACTATTTGTGAAAAATGCTTTTG
 
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JMFS078G08+           CCATTTTATTTGCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
JMSF034E12+           CCATTTTATTTGCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
JMFS163B08+           CCATTTTATNTGCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
JMFF010J06+                     TGCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
JMSF050C11+                      GCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
                      ____________________________________________________________
consensus             CCATTTTATTTGCAGTAAATGTATCTAGAAGTTCCTTGGCAAGATCCAAAGAAGGCTTTG
 
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JMFS078G08+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMSF034E12+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMFS163B08+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMFF010J06+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMSF023B13+                CGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMFF047E14+                                                             ATAGCAGCAT
JMFF027L09+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
JMSF050C11+           TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
                      ____________________________________________________________
consensus             TTGTACGATTCCAAAATGAGTGATAAAATGGCAATGTATTTAGTTGTTTCATAGCAGCAT
 
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JMFS078G08+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMSF034E12+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMFS163B08+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMFF010J06+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGCGCACCATAAACCTGCCAGGGAATCA
JMSF023B13+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMFF005C13+                       GTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMFF047E14+           CAACAAGACGTGTTTCATTTCCACCCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMFF027L09+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
JMSF050C11+           CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
                      ____________________________________________________________
consensus             CAACAAGACGTGGTTCATTTCCA-CCTAAAGCTGTGCACCATAAACCTGCCAGGGAATCA
 
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JMFS078G08+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMSF034E12+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFS163B08+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFF010J06+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMSF023B13+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFF005C13+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFF047E14+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFF027L09+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
JMFF030B19+                                                                TACTAAG
JMSF050C11+           AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
                      ____________________________________________________________
consensus             AGATATTTCTTTCCGTTTATATCATAAACATAGGAACCCTCAGACTTTTCTATTACTAAG
 
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JMFS078G08+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMSF034E12+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCNTTA
JMFS163B08+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMFF010J06+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMSF023B13+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMFF005C13+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMFF047E14+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMFF027L09+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMFF030B19+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
JMSF050C11+           GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
                      ____________________________________________________________
consensus             GGATGCAGATCGGTAGTTTGCCACCCTGCAGTAAAGGGTGCCAACATATCATGCCCCTTA
 
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JMFS078G08+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMSF034E12+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFS163B08+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFF010J06+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMSF023B13+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFF005C13+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFF047E14+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFF027L09+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMFF030B19+           AATCNTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
JMSF050C11+           AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
                      ____________________________________________________________
consensus             AATCCTTTTTCATCAGTGGAATCATTCTGCACAGATACCTGTGCACTACTCCATCTGGTC
 
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JMFS078G08+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMSF034E12+           GGTGAGCGTNTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFS163B08+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFF010J06+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATG-------
JMSF023B13+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFF005C13+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFF047E14+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFF027L09+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMFF030B19+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
JMSF050C11+           GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
                      ____________________________________________________________
consensus             GGTGAGCGTCTACGAATAATAGATCCATGCGAACCACTAACTGCAGGAAGATGCTTTACA
 
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JMFS078G08+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMSF034E12+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFS163B08+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFF010J06+           -----------CTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMSF023B13+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFF005C13+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFF047E14+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFF027L09+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMFF030B19+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
JMSF050C11+           TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
                      ____________________________________________________________
consensus             TGGGAGCCAACCTGGTTGGTGGCTCTCTTGAGAGTGTGCCCGAGAAGGCGATTGATCATT
 
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JMFS078G08+           GCAACTGCTTCTCT                                              
JMSF034E12+           GCAACTGCTTNTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMFS163B08+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMFF010J06+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMSF023B13+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATC   
JMFF005C13+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMFF047E14+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMFF027L09+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMFF030B19+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
JMSF050C11+           GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
                      ____________________________________________________________
consensus             GCAACTGCTTCTCTGGTTCTCCTTCCCTTCTAGGAAAAATTATTTAGCTGTGAGATCAAA
 
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JMSF034E12+           ATATCTTC                                                    
JMFS163B08+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGA          
JMFF010J06+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAGATG
JMFF005C13+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAG   
JMFF047E14+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGA      
JMFF027L09+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAGATG
JMFF030B19+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAGATG
JMSF050C11+           ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAGATG
                      ____________________________________________________________
consensus             ATATCTTCTGTTGGAAAGCAGGAAAAATTGAAAATTCTATGTGAGAGAGAGAGAGAGATG
 
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JMFF010J06+           AAAGT                                                       
JMFF027L09+           AAAGT                                                       
JMFF030B19+           AAAGT                                                       
JMSF050C11+           AAAGTGGGGCCTGTCTCAGGAATGAGGGAGGAGATAAAGAAGCAAGAATGCCAGCAAGCC
                      ____________________________________________________________
consensus             AAAGTGGGGCCTGTCTCAGGAATGAGGGAGGAGATAAAGAAGCAAGAATGCCAGCAAGCC