| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005O10 | Sequence | 520 | 013266 (6) | ref|XP_009615934.1| | 8e-27 | PREDICTED: uncharacterized protein LOC104108568 isoform X2 [Nicotiana tomentosi | |||||
| JMFF032H24 | Sequence | 616 | 013266 (6) | ref|XP_009615934.1| | 5e-45 | PREDICTED: uncharacterized protein LOC104108568 isoform X2 [Nicotiana tomentosi | 128 | 013266 (6) | ref|XP_009615934.1| | 1e-05 | PREDICTED: uncharacterized protein LOC104108568 isoform X2 [Nicotiana tomentosi |
| JMSF010H12 | Sequence | 231 | 013266 (6) | 755 | 013266 (6) | ref|XP_009769969.1| | 2e-60 | PREDICTED: uncharacterized protein LOC104220737 isoform X2 [Nicotiana sylvestri | |||
| JMSF029G03 | Sequence | 693 | 013266 (6) | ref|XP_009769969.1| | 6e-52 | PREDICTED: uncharacterized protein LOC104220737 isoform X2 [Nicotiana sylvestri | 778 | 021492 | ref|XP_009769968.1| | 7e-43 | PREDICTED: uncharacterized protein LOC104220737 isoform X1 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF010H12- ATTCTGGTCTTATATTATAGTA
____________________________________________________________
consensus ATTCTGGTCTTATATTATAGTA
. : . : . : . : . : . :
rJMSF010H12- CATGCTCCATTGTTCATTCCAAAAGAAATTTAGTAACCAAATTGAACTATAAGTCTATAA
____________________________________________________________
consensus CATGCTCCATTGTTCATTCCAAAAGAAATTTAGTAACCAAATTGAACTATAAGTCTATAA
. : . : . : . : . : . :
rJMSF010H12- TATATACATATATTGTAGCTTCGACGAATTCTTGCAGAATATGATCAAGCTCGTTTCAGC
____________________________________________________________
consensus TATATACATATATTGTAGCTTCGACGAATTCTTGCAGAATATGATCAAGCTCGTTTCAGC
. : . : . : . : . : . :
rJMFF032H24- ACAACCACCATTATCGCCATGATTGCCANTCCCATAAACGACGCACCCCNGGNTCTATCC
rJMSF010H12- ACAACCACCATTATCGCCATGATTGCCAATCCCATAAACGACGCACCCAAGGCTCTATCC
____________________________________________________________
consensus ACAACCACCATTATCGCCATGATTGCCAATCCCATAAACGACGCACCCCAGGCTCTATCC
. : . : . : . : . : . :
rJMFF032H24- ACCNCGCTNGTTTTGGCACTTCCATCNGNNTCNGCAANTACTTTGTGACCTCCNAAGAGA
rJMSF010H12- ACCACGCTTGTTTTGGCACTTCCATCAGCATCTGCAAATACTTTGTGACCTCCGAAGAGA
____________________________________________________________
consensus ACCACGCTTGTTTTGGCACTTCCATCAGCATCTGCAAATACTTTGTGACCTCCGAAGAGA
. : . : . : . : . : . :
rJMFF032H24- TTTTGGAA
rJMSF010H12- TTTTGGAAGAAATCGGATAAGCAGTTCATCATATCAAGAACTGCCACTTTAATATTCTGC
____________________________________________________________
consensus TTTTGGAAGAAATCGGATAAGCAGTTCATCATATCAAGAACTGCCACTTTAATATTCTGC
. : . : . : . : . : . :
rJMSF010H12- AAGAAATCTGTAAAACCATTCCCGGGTTTAGGGGACCCGTCTTCTGATGTCAAGTCATCA
____________________________________________________________
consensus AAGAAATCTGTAAAACCATTCCCGGGTTTAGGGGACCCGTCTTCTGATGTCAAGTCATCA
. : . : . : . : . : . :
rJMSF010H12- TTCCTCGGTGATGAATAACGTAAGAAATCAGTCTCTGCAATGGATTCCTCCACGCTGTAC
____________________________________________________________
consensus TTCCTCGGTGATGAATAACGTAAGAAATCAGTCTCTGCAATGGATTCCTCCACGCTGTAC
. : . : . : . : . : . :
rJMSF010H12- TCACCATCGAGGACATAAGCACTGGTTTTCTGTGACACGAGGAATTCCTGGAGCTCTGGG
JMFF032H24+ CTGGG
JMSF029G03+ ACTGGTTTTCTGTGACACGAGGAATTCCTGGAGCTCTGGG
____________________________________________________________
consensus TCACCATCGAGGACATAAGCACTGGTTTTCTGTGACACGAGGAATTCCTGGAGCTCTGGG
. : . : . : . : . : . :
rJMSF010H12- TTTGCCAAAACTGCGTTCCAAACGTTTGGATCAGAAGCAATTGAAGCAACAACAGTCTGG
JMFF032H24+ TTTGCCAAAACTGCGTTCCAAACGTTTGGATCAGAAGCAATTGAAGCAACAACAGTCTGG
JMSF029G03+ TTTGCCAAAACTGCGTTCCAAACGTTTGGATCAGAAGCAATTGAAGCAACAACAGTCTGG
____________________________________________________________
consensus TTTGCCAAAACTGCGTTCCAAACGTTTGGATCAGAAGCAATTGAAGCAACAACAGTCTGG
. : . : . : . : . : . :
rJMSF010H12- GCAGCAGCATTTTCATAGAGGAACTTAAATGCCCGAATGGCATGTTTTGGTGCCCCATGA
JMFF032H24+ GCAGCAGCATTTTCATAGAGGAACTTAAATGCCCGAATGGCATGTTTTGGTGCCCCATGA
JMFF005O10+ CCGAATGGCATGTTTTGGTGCCCCATGA
JMSF029G03+ GCAGCAGCATTTTCATAGAGGAACTTAAATGCCCGAATGGCATGTTTTGGTGCCCCATGA
____________________________________________________________
consensus GCAGCAGCATTTTCATAGAGGAACTTAAATGCCCGAATGGCATGTTTTGGTGCCCCATGA
. : . : . : . : . : . :
rJMSF010H12- GCGATGGCGTTTTCACTAGAGGAGTTCGATGGTGGGGAGTGGTCATTATTCACTTGAGCA
JMFF032H24+ GCGATGGCGTTTTCACTAGAGGAGTTCGATGGTGGGGAGTGGTCATTATTCACTTGAGCA
JMFF005O10+ GCGATGGCGTTTTCACTAGAGGAGTTCGATGGTGGGGAGTGGTCATTATTCACTTGAGCA
JMSF029G03+ GCGATGGCGTTTTCACTAGAGGAGTTCGATGGTGGGGAGTGGTCATTATTCACTTGAGCA
____________________________________________________________
consensus GCGATGGCGTTTTCACTAGAGGAGTTCGATGGTGGGGAGTGGTCATTATTCACTTGAGCA
. : . : . : . : . : . :
rJMSF010H12- GCACCATTGGTAC-TTCCACAGTCACTGGGAGGTGTGCTCATATTATACACCTTGTGAAG
JMFF032H24+ GCACCATTGGTAC-TTCCACAGTCACTGGGAGGTGTGCTCATATTATACACCTTGTGAAG
JMFF005O10+ GCACCATTGGTACTTTCCACAGTCACTGGGAGGTGTGCTCATATTATACACCTTGTGAAG
JMSF029G03+ GCACCATTGGTAC-TTCCACAGTCACTGGGAGGTGTGCTCATATTATACACCTTGTGAAG
____________________________________________________________
consensus GCACCATTGGTAC-TTCCACAGTCACTGGGAGGTGTGCTCATATTATACACCTTGTGAAG
. : . : . : . : . : . :
rJMSF010H12- GGCGTCCTTGAGAT
JMFF032H24+ GGCGTCTTTGAGATCGAAAGTGGCCTCTTTGGCCTCCTGGAGAGAAGGGGCGCCACCAAA
JMFF005O10+ GGCGTCTTTGAGATCGAAAGTGGCCTCTTTGGCCTCCTGGAGAGAAGGGGCGCCACCAAA
JMSF029G03+ GGCGTCTTTGAGATCGAAAGTGGCCTCTTTGGCCTCCTGGAGAGAAGGGGCGCCACCAAA
____________________________________________________________
consensus GGCGTCTTTGAGATCGAAAGTGGCCTCTTTGGCCTCCTGGAGAGAAGGGGCGCCACCAAA
. : . : . : . : . : . :
JMFF032H24+ GATGAGTCTCGGGAGCGGCTCACCAGCGGCGACCATCTCCTCCTCGTCCCCGCCGGCAAA
JMFF005O10+ GATGAGTCTCGGGAGCGGCTCACCAGCGGCGACCATCTCCTCCTCGTCCCCGCCGGCAAA
JMSF029G03+ GATGAGTCTCGGGAGCGGCTCACCAGCGGCGACCATCTCCTCCTCGTCCCCGCCGGCAAA
____________________________________________________________
consensus GATGAGTCTCGGGAGCGGCTCACCAGCGGCGACCATCTCCTCCTCGTCCCCGCCGGCAAA
. : . : . : . : . : . :
JMFF032H24+ TTCCCAGCCATCGAGCTCCCGGCATGGCCACTGCACGGGTGCTCCATCCACCGCAGTGCT
JMFF005O10+ TTCCCAGCCATCGAGCTCCCGGCATGGCCACTGCACGGGTGCTCCATCCACCGCAGTGCT
JMSF029G03+ TTCCCAGCCATCGAGCTCCCGGCATGGCCACTGCACGGGTGCTCCATCCACCGCAGTGCT
____________________________________________________________
consensus TTCCCAGCCATCGAGCTCCCGGCATGGCCACTGCACGGGTGCTCCATCCACCGCAGTGCT
. : . : . : . : . : . :
JMFF032H24+ TTGTGAAGCTGAAACAGCACTCGACTTCAGGTGGTCCGAAGAAGACGAAATCCCGGAAAC
JMFF005O10+ TTGTGAAGCTGAAACAGCACTCGACTTCAGGTGGTCCGAAGAAGACGAAATCCCGGAAAC
JMSF029G03+ TTGTGAAGCTGAAACAGCACTCGACTTCAGGTGGTCCGAAGAAGACGAAATCCCGGAAAC
JMSF010H12+ TGAAACAGCACTCGACTTCAGGTGGTCCGAAGAAGACGAAATCCCGGAAAC
____________________________________________________________
consensus TTGTGAAGCTGAAACAGCACTCGACTTCAGGTGGTCCGAAGAAGACGAAATCCCGGAAAC
. : . : . : . : . : . :
JMFF032H24+ GGAGACCGGGCGGACAACCTTGCGAGCGGCAGAAGATACAGGATGCTCCGACGCGATTCC
JMFF005O10+ GGAGACCGGGCGGACAACCTTGCGAGCGGCAGAAGATACAGGATGCTCCGACGCGATTCC
JMSF029G03+ GGAGACCGGGCGGACAACCTTGCGAGCGGCAGAAGATACAGGATGCTCCGACGCGATTCC
JMSF010H12+ GGAGACCGGGCGGACAACCTTGCGAGCGGCAGAAGATACAGGATGCTCCGACGCGATTCC
____________________________________________________________
consensus GGAGACCGGGCGGACAACCTTGCGAGCGGCAGAAGATACAGGATGCTCCGACGCGATTCC
. : . : . : . : . : . :
JMFF032H24+ CCGAAAGCCACTGTTGGCAACAGTGATTCCGGCTGCCTTCGCCACCGCCGCCGCTCTCAT
JMFF005O10+ CCGAAAGCCACTGTTGGCAACAGTGATTCCGGCTGCCTTCGCCACCGCCGCCGCTCTCAT
JMSF029G03+ CCGAAAGCCACTGTTGGCAACAGTGATTCCGGCTGCCTTCGCCACCGCCGCCGCTCTCAT
JMSF010H12+ CCGAAAGCCACTGTTGGCAACAGTGATTCCGGCTGCCTTCGCCACCGCCGCCGCTCTCAT
____________________________________________________________
consensus CCGAAAGCCACTGTTGGCAACAGTGATTCCGGCTGCCTTCGCCACCGCCGCCGCTCTCAT
. : . : . : . : . : . :
JMFF032H24+ CGCCCCTCCACC
JMFF005O10+ CGCCCCTCCACC
JMSF029G03+ CGCCCCTCCACCACTCATATTTGTTGGATACTT
JMSF010H12+ CGCCCCTCCACCACTCATATTTGTTGGATACTTAGATTATTAAGGGGGAAATCAAGCGTC
____________________________________________________________
consensus CGCCCCTCCACCACTCATATTTGTTGGATACTTAGATTATTAAGGGGGAAATCAAGCGTC