clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF029A03 | Sequence | 575 | 012646 (3) | gb|EYU19206.1| | 2e-38 | hypothetical protein MIMGU_mgv1a004325mg [Erythranthe guttata] | 519 | 001362 (4) | ref|XP_006352487.1| | 2e-38 | PREDICTED: probable galacturonosyltransferase 12-like [Solanum tuberosum] |
JMSF022P22 | Sequence | 717 | 012646 (3) | ref|XP_009611117.1| | 2e-83 | PREDICTED: probable galacturonosyltransferase 12 [Nicotiana tomentosiformis] | 731 | 001362 (4) | ref|XP_006452153.1| | 4e-83 | hypothetical protein CICLE_v10007975mg [Citrus clementina] gb|ESR65393.1| hypoth |
JMSF027I07 | Sequence | 684 | 012043 (2) | ref|XP_009794100.1| | 237 | PREDICTED: uncharacterized protein LOC104240898 [Nicotiana sylvestris] ref|XP_00 | 771 | 012646 (3) |
This contig is upended
. : . : . : . : . : . :
JMSF022P22+ GGAAGGGACCAGCTCTGGTGATGGTAACTG
____________________________________________________________
consensus GGAAGGGACCAGCTCTGGTGATGGTAACTG
. : . : . : . : . : . :
JMSF022P22+ GAGACGAGCATTAGCATTGCTCGAGTGCTCGTTTGCTAACATTAGCGAAAGGCAGTGCAG
____________________________________________________________
consensus GAGACGAGCATTAGCATTGCTCGAGTGCTCGTTTGCTAACATTAGCGAAAGGCAGTGCAG
. : . : . : . : . : . :
JMFF029A03+ TTCGCAGT
JMSF022P22+ CTGTTTAGGGATGCTATTCGATGCCACGTGGCGATACAGGTACTCTTGGATTTTCGCAGT
____________________________________________________________
consensus CTGTTTAGGGATGCTATTCGATGCCACGTGGCGATACAGGTACTCTTGGATTTTCGCAGT
. : . : . : . : . : . :
JMFF029A03+ TCTAGTTGTTTGCTCGAGGAAATTTATCATAGCTTTTAGCTTGGCTGCAAAGGTCTTTGC
JMSF022P22+ TCTAGTTGTTTGCTCGAGGAAATTTATCATAGCTTTTAGCTTGACTGCAAAGGTCTTTGC
____________________________________________________________
consensus TCTAGTTGTTTGCTCGAGGAAATTTATCATAGCTTTTAGCTTGGCTGCAAAGGTCTTTGC
. : . : . : . : . : . :
JMFF029A03+ ATCTGGTCTATCGCCTTTGAATTCTGCAATTAAGTCTTCGAGGGTCTGAGGAGTTTCGGG
JMSF022P22+ ATCTGGTCTATCGCCTTTGAATTCTGCAATTAAGTCTTCGAGGGTCTGAGGAGTTTCGGG
____________________________________________________________
consensus ATCTGGTCTATCGCCTTTGAATTCTGCAATTAAGTCTTCGAGGGTCTGAGGAGTTTCGGG
. : . : . : . : . : . :
JMFF029A03+ TCCCACTTGTATCTCGGTTTCGTTTGCTGGTTCCTCCAATACACTGTATATCACTTCTGG
JMSF022P22+ TCCCACTTGTATCTCGGTTTCGTTTGCTGGTTCCTCCAATACACTGTATATCACTTCTGG
____________________________________________________________
consensus TCCCACTTGTATCTCGGTTTCGTTTGCTGGTTCCTCCAATACACTGTATATCACTTCTGG
. : . : . : . : . : . :
JMFF029A03+ GAGTGTTGATTCAAGCTGCCTTCCTAAATATACTCGGTCGTATTTTTCTTCCAAAGCAAC
JMSF022P22+ GAGTGTTGATTCAAGCTGCCTTCCTAAA-ATACTCGGTCGTATTTTTCTTCCAAAGCAAC
____________________________________________________________
consensus GAGTGTTGATTCAAGCTGCCTTCCTAAATATACTCGGTCGTATTTTTCTTCCAAAGCAAC
. : . : . : . : . : . :
JMFF029A03+ CTATGCCCGAACACTTGCTTTCTCCGTCAATGGTGTCCACAGCCGTGAACAAGAACACGA
JMSF022P22+ CTATGCCCGAACACTTGCTTTCTCCGTCAATGGTGTCCACAGCCGTGAACAAGAACACGA
____________________________________________________________
consensus CTATGCCCGAACACTTGCTTTCTCCGTCAATGGTGTCCACAGCCGTGAACAAGAACACGA
. : . : . : . : . : . :
JMFF029A03+ ACCGGAGAAGAAACGTGAAGAGCAGGAGGGAGTAGAAGACGACGCGAAAGGACACCCGTC
JMSF022P22+ ACCGGAGAAGAAACGTGAAGAGCAGGAGGGAGTAGAAGACGACGCGAAAGGACACCCGTC
rJMSF027I07+ GAAACGTGNAGAGCAGGAGGGAGTAGAAGACGACGCGAAAGGACACCCGTC
____________________________________________________________
consensus ACCGGAGAAGAAACGTGAAGAGCAGGAGGGAGTAGAAGACGACGCGAAAGGACACCCGTC
. : . : . : . : . : . :
JMFF029A03+ TCGACACAATTCTGAACTTGATGAACTCCTTCACGCCTTTGGTGGGAAGCACCGTCACGT
JMSF022P22+ TCGACACAATTCTGAACTTGATGAACTCCTTCACGCCTTTGGTGGGAAGCACCGTCACGT
rJMSF027I07+ TCGACACAATTCTGAACCTGATGAACTCCTTCACGCCTTTGGTGGGAAGCACCGTCACGT
____________________________________________________________
consensus TCGACACAATTCTGAACTTGATGAACTCCTTCACGCCTTTGGTGGGAAGCACCGTCACGT
. : . : . : . : . : . :
JMFF029A03+ GCCTCAGGCTCGGGGATATGTGAAGCTGCATTTCCGATACTCGAGAAACGAAACGAAACC
JMSF022P22+ GCCTCAGGCTCGGGGATATGTGAAGCTGCATTTCCGATACTCGAGAAACGAAACGAAACC
rJMSF027I07+ GCCTCAGGCTCGGGGATATGTGAAGCTGCATTTCCGATACTCGAGAAACGAAACGAAACC
____________________________________________________________
consensus GCCTCAGGCTCGGGGATATGTGAAGCTGCATTTCCGATACTCGAGAAACGAAACGAAACC
. : . : . : . : . : . :
JMFF029A03+ ACCCCGCTCCCCGGGATTTCTTCCTTTGCTAGTCTTGTCTCCAGCAGTTGGATCACCGGA
JMSF022P22+ ACCCCGCTCCCCGGGATTTCTTCCTTTGCTAGTCTTGTCTCCAGCAGTTGGATCACCGGA
rJMSF027I07+ ACCCCGCTCCCCGGGATTTCTTCCTTTGCTAGTCTTGTCTCCAGCAGTTGGATCACCGGA
____________________________________________________________
consensus ACCCCGCTCCCCGGGATTTCTTCCTTTGCTAGTCTTGTCTCCAGCAGTTGGATCACCGGA
. : . : . : . : . : . :
JMFF029A03+ AAAAGGAAAAAAGGGCGGGCATCCAAT
JMSF022P22+ AAAAAGAAAAAAGGGCGGGCATCCAAT
rJMSF027I07+ AAAAGGAAAAAAGGGCGGGCATCCAATGAGTGAGTTGCTGGTGCAGAAGAAAGAGGCTTT
____________________________________________________________
consensus AAAAGGAAAAAAGGGCGGGCATCCAATGAGTGAGTTGCTGGTGCAGAAGAAAGAGGCTTT
. : . : . : . : . : . :
rJMSF027I07+ TTGAGGGGTGATAACGGTGCCCTCCTCGCGGTCGCTATCTATCACCTAAACTTGCTTAAC
____________________________________________________________
consensus TTGAGGGGTGATAACGGTGCCCTCCTCGCGGTCGCTATCTATCACCTAAACTTGCTTAAC
. : . : . : . : . : . :
rJMSF027I07+ ATATCAGCCATGTATGCAGTCTTCCAGGTTTTACCACCATCTATCATATCATTACTTTGA
____________________________________________________________
consensus ATATCAGCCATGTATGCAGTCTTCCAGGTTTTACCACCATCTATCATATCATTACTTTGA
. : . : . : . : . : . :
rJMSF027I07+ CAAAGGAATATTGTAATGGTGACTTAGTTTGTTTGAGAGATAGAGACATGGGACTTACAG
____________________________________________________________
consensus CAAAGGAATATTGTAATGGTGACTTAGTTTGTTTGAGAGATAGAGACATGGGACTTACAG
. : . : . : . : . : . :
rJMSF027I07+ AGGCTGTGGAATGGCCGGTTTTTCTTGGCTTGATGTTGAAGAAGAGAAGTTGGAGAGAAA
____________________________________________________________
consensus AGGCTGTGGAATGGCCGGTTTTTCTTGGCTTGATGTTGAAGAAGAGAAGTTGGAGAGAAA
. : . : . : . : . : . :
rJMSF027I07+ GGGGAAAGGGCAAAGAGAGATTAATTTAGTTTAGTTTTGGTTTTGGTTTGGTGTTTGCTT
____________________________________________________________
consensus GGGGAAAGGGCAAAGAGAGATTAATTTAGTTTAGTTTTGGTTTTGGTTTGGTGTTTGCTT
. : . : . : . : . : . :
rJMSF027I07+ CACTTTGCCTCCACCTTATGAATAGGAAGGTTTGGGTGTATTTTGACACAACTGAATTTC
____________________________________________________________
consensus CACTTTGCCTCCACCTTATGAATAGGAAGGTTTGGGTGTATTTTGACACAACTGAATTTC
. : . : . : . : . : . :
rJMSF027I07+ TGACAGGAAAATGACTGTATCTCTGCCTAATATTATACGCATTGGTTGTTGAATTGGCAG
____________________________________________________________
consensus TGACAGGAAAATGACTGTATCTCTGCCTAATATTATACGCATTGGTTGTTGAATTGGCAG
. : . : . : . : . : . :
rJMSF027I07+ TTTAGGGAAGAGTCATTTTCCATTTGTGTGAAATTCTTTGTTTAACTCAATCCTTCTTAG
____________________________________________________________
consensus TTTAGGGAAGAGTCATTTTCCATTTGTGTGAAATTCTTTGTTTAACTCAATCCTTCTTAG