Contig 012028:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044E19Sequence632012028 (7)ref|XP_006352682.1|6e-53PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]639009789 (7)ref|XP_009775386.1|3e-61PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris]
JMSF002I14Sequence402012028 (7)ref|XP_006352682.1|3e-23PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]695009789 (7)ref|XP_009775386.1|5e-111PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris]
JMSF007F13Sequence413012028 (7)ref|XP_006352682.1|4e-23PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]764009789 (7)ref|XP_011089660.1|2e-146PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum]
JMSF011G21Sequence252012028 (7)764009789 (7)ref|XP_009775386.1|8e-112PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris]
JMSF019C04Sequence311012028 (7)ref|XP_006352682.1|1e-12PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]759009789 (7)ref|XP_011089660.1|1e-143PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum]
JMSF025M11Sequence606012028 (7)ref|XP_006352682.1|3e-48PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]762009789 (7)ref|XP_011089660.1|4e-136PREDICTED: galacturonosyltransferase 8-like [Sesamum indicum]
JMSF035J02Sequence668012028 (7)ref|XP_006352682.1|2e-72PREDICTED: galacturonosyltransferase 8-like [Solanum tuberosum]634009789 (7)ref|XP_009775386.1|1e-105PREDICTED: galacturonosyltransferase 8 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035J02+ GCTGATCATTCACAGCAAAAATAGTATCCTTGAGCTTCTGAATCTTTAAC
                      ____________________________________________________________
consensus GCTGATCATTCACAGCAAAAATAGTATCCTTGAGCTTCTGAATCTTTAAC
 
. : . : . : . : . : . :
JMSF035J02+ TGATTATCAAAAGACTCCTTTGCCTCAGCAACAACTTGACGCGTGACTTTGATTCTTTCT
JMFF044E19+ GCAACAACTTGACGCGTGACTTTGATTCTNTCT
JMSF025M11+ TCT
                      ____________________________________________________________
consensus TGATTATCAAAAGACTCCTTTGCCTCAGCAACAACTTGACGCGTGACTTTGATTCTTTCT
 
. : . : . : . : . : . :
JMSF035J02+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
JMFF044E19+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
JMSF025M11+ TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
                      ____________________________________________________________
consensus TTCACCTCCTTCTCAAACTGCCGAAGCACTGATTCATCAAGTGAGTTGGAATCCAACTCA
 
. : . : . : . : . : . :
JMSF035J02+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
JMFF044E19+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
JMSF025M11+ AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
                      ____________________________________________________________
consensus AACAGTGCTCTATATGCAGGCTTTGAGATCAAATCTGTATAGTTTCGTGACAACTCTGCA
 
. : . : . : . : . : . :
JMSF007F13+ CAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF035J02+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF002I14+ TTTCGAGCATAGGAAGCATAAGCC
JMFF044E19+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
JMSF025M11+ AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
                      ____________________________________________________________
consensus AAGACTCGAACAAGTTTTGAGTTTTCAAGCTTCAGCTTTCGAGCATAGGAAGCATAAGCC
 
. : . : . : . : . : . :
JMSF007F13+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF035J02+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF002I14+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMFF044E19+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
JMSF025M11+ AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
                      ____________________________________________________________
consensus AAAGCCAGAGCTCGGTGATCCTCTGCTTGCTTCCTGATCAGATCAAACCTTGGCTTTAAT
 
. : . : . : . : . : . :
JMSF007F13+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF019C04+ ATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF035J02+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF002I14+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMFF044E19+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
JMSF025M11+ GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
                      ____________________________________________________________
consensus GGATCCGATTTCAGAGCCAGTACGGATCTTCGAACTGGCCCTACTCCATATGCATCGTGC
 
. : . : . : . : . : . :
JMSF007F13+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF019C04+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF035J02+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF002I14+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF011G21+ GATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMFF044E19+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
JMSF025M11+ AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
                      ____________________________________________________________
consensus AAAATGCCGACGTTGAGATCGGCGGGATCCGAGGAGGAAGTGTAGCGCAGGGAGAGAGTT
 
. : . : . : . : . : . :
JMSF007F13+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF019C04+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF035J02+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF002I14+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF011G21+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMFF044E19+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
JMSF025M11+ AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
                      ____________________________________________________________
consensus AAGAAGAGAAAAACGGCGATAGTGAGAACGGAGGCGAAGAGCTTAAAGATGAAGCGGCCG
 
. : . : . : . : . : . :
JMSF007F13+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF019C04+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF035J02+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF002I14+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF011G21+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMFF044E19+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
JMSF025M11+ GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
                      ____________________________________________________________
consensus GCAGCGGATCGTCCGAAAAGGCCGCCGGAGGTCCGATCTGTGGCCGACCGGTAGCTACGA
 
. : . : . : . : . : . :
JMSF007F13+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF019C04+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF035J02+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF002I14+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF011G21+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMFF044E19+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
JMSF025M11+ ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
                      ____________________________________________________________
consensus ACCGTCGGTGCGATAGCCATTTTTGCTTCTCTTTCTCCGAAGAGAGAGAGAGGGAGAGTT
 
. : . : . : . : . : . :
JMSF007F13+ CACAGTTTAGTAGGAG
JMSF019C04+ CACAGTTTAGTAGGAG
JMSF035J02+ CACAGTTTAGTAGGAG
JMSF002I14+ CACAGTTTAGTAGGAGT
JMSF011G21+ CACAGTTTAGTAGGAGTGGTAGTTTCTG
JMFF044E19+ CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGT
JMSF025M11+ CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGTC
                      ____________________________________________________________
consensus CACAGTTTAGTAGGAGTGGTAGTTTCTGAACTGGCAGTGAAATCTATACGCGGGTTTGTC