Contig 011292:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H21Sequence457011292 (2)ref|XP_009791997.1|2e-49PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Nicotiana748011292 (2)ref|XP_009595113.1|1e-103PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF016H21- GATGGTGATGTATTACACTCCGACGACGACGCCTCCC
                      ____________________________________________________________
consensus GATGGTGATGTATTACACTCCGACGACGACGCCTCCC
 
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JMSF016H21- GCCTTCCCCTGTGAATCTGCGACGAAGCAAGCAGAAGACAACGAAGGTTAGGCCGACGAC
                      ____________________________________________________________
consensus GCCTTCCCCTGTGAATCTGCGACGAAGCAAGCAGAAGACAACGAAGGTTAGGCCGACGAC
 
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JMSF016H21- GCTGCCTCCCTCCCTCCCCTGCGAATCTGGGTTTCAGTGAAAATTGTGTATTTTCACATG
rJMSF016H21+ TTCAGTGAAAATTGTGTATTTTCACATG
                      ____________________________________________________________
consensus GCTGCCTCCCTCCCTCCCCTGCGAATCTGGGTTTCAGTGAAAATTGTGTATTTTCACATG
 
. : . : . : . : . : . :
JMSF016H21- GGTGATGGTGGTGCTAATGGGGCTGACAAGAGAATAGTTTTTGTGACCGTTGGAACTACT
rJMSF016H21+ GGTGATGGTGGTGCTAATGGGGCTGACAAGAGAATAGTTTTTGTGACCGTTGGAACTACT
                      ____________________________________________________________
consensus GGTGATGGTGGTGCTAATGGGGCTGACAAGAGAATAGTTTTTGTGACCGTTGGAACTACT
 
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JMSF016H21- TGTTTTGATGCTCTAGTTAATGCTGTGGACACTGCTGAAGTTAGGAAAGAGTTGTTCGAG
rJMSF016H21+ TGTTTTGATGCTCTAGTTAATGCTGTGGACACTGCTGAAGTTAGGAAAGAGTTGTTCGAG
                      ____________________________________________________________
consensus TGTTTTGATGCTCTAGTTAATGCTGTGGACACTGCTGAAGTTAGGAAAGAGTTGTTCGAG
 
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JMSF016H21- AAAGGCTATACTGATATTATTGTTCAAATGGGTCGTGGAACCTATGTTCCCACAAAGTCT
rJMSF016H21+ AAAGGCTATACTGATATTATTGTTCAAATGGGTCGTGGAACCTATGTTCCCACAAAGTCT
                      ____________________________________________________________
consensus AAAGGCTATACTGATATTATTGTTCAAATGGGTCGTGGAACCTATGTTCCCACAAAGTCT
 
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JMSF016H21- GCCTCAGAAAATGGATCCCCAGCGCTGGACTATTTCACTTTCTCATCAAGCATAGCCAAA
rJMSF016H21+ GCCTCAGAAAATGGATCCCCAGCGCTGGACTATTTCACTTTCTCATCAAGCATAGCCAAA
                      ____________________________________________________________
consensus GCCTCAGAAAATGGATCCCCAGCGCTGGACTATTTCACTTTCTCATCAAGCATAGCCAAA
 
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JMSF016H21- TATCTGAAATCAGCATCTCTTGTTATTAGCCATGCGGGTTCGGGAAGCATATTTGAGACA
rJMSF016H21+ TATCTGAAATCAGCATCTCTTGTTATTAGCCATGCGGGTTCGGGAAGCATATTTGAGACA
                      ____________________________________________________________
consensus TATCTGAAATCAGCATCTCTTGTTATTAGCCATGCGGGTTCGGGAAGCATATTTGAGACA
 
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rJMSF016H21+ TTGCAACTAGGCAAACCATTGATCGTGGTAGTCAATGAAGATTTAATGGACAATCATCAA
                      ____________________________________________________________
consensus TTGCAACTAGGCAAACCATTGATCGTGGTAGTCAATGAAGATTTAATGGACAATCATCAA
 
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rJMSF016H21+ AGCGAGCTAGCGGAAGAACTTGCTGATAGAAAGCATTTGTTTTGTGCACGTCCACAGACG
                      ____________________________________________________________
consensus AGCGAGCTAGCGGAAGAACTTGCTGATAGAAAGCATTTGTTTTGTGCACGTCCACAGACG
 
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rJMSF016H21+ CTATACCAAACCATCGCAGACATGGACTTGGAGTCTGTTGTTCCATATCAACCAGGTGAC
                      ____________________________________________________________
consensus CTATACCAAACCATCGCAGACATGGACTTGGAGTCTGTTGTTCCATATCAACCAGGTGAC
 
. : . : . : . : . : . :
rJMSF016H21+ GCTAAGCCAGTAGCTAAACTCATTAATAGTCATCTTGGTTTCCCTGAGGAATGATCTGAT
                      ____________________________________________________________
consensus GCTAAGCCAGTAGCTAAACTCATTAATAGTCATCTTGGTTTCCCTGAGGAATGATCTGAT
 
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rJMSF016H21+ GATGGTTCAAAGAATCATCTTAGAGTCAAAGTAGATCTTTAAAGTTCTAATGTGATATAA
                      ____________________________________________________________
consensus GATGGTTCAAAGAATCATCTTAGAGTCAAAGTAGATCTTTAAAGTTCTAATGTGATATAA
 
. : . : . : . : . : . :
rJMSF016H21+ TATTGAGCAGAGTGTACTAAATTGGGCAGTTTCTACAATGTCATACTTCCCAAAAAGGAA
                      ____________________________________________________________
consensus TATTGAGCAGAGTGTACTAAATTGGGCAGTTTCTACAATGTCATACTTCCCAAAAAGGAA
 
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rJMSF016H21+ ACAGCTATGCTTAGGCATAATTATAGAAAAAATGTCATTTTGTACTAGAAAAAATGTCAT
                      ____________________________________________________________
consensus ACAGCTATGCTTAGGCATAATTATAGAAAAAATGTCATTTTGTACTAGAAAAAATGTCAT