Contig 011240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003G24Sequence296002058 (3)754011240 (2)ref|XP_009766630.1|218PREDICTED: uncharacterized protein LOC104217966 [Nicotiana sylvestris]
JMSF037J06Sequence627002058 (3)ref|XP_006354938.1|174PREDICTED: uncharacterized protein LOC102588271 [Solanum tuberosum]770011240 (2)ref|XP_009766630.1|220PREDICTED: uncharacterized protein LOC104217966 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF037J06+ TGCTCGCA
                      ____________________________________________________________
consensus TGCTCGCA
 
. : . : . : . : . : . :
rJMSF037J06+ GTGGGCTATTCTATGGGAATGCTTTCACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
rJMSF003G24+ ACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
                      ____________________________________________________________
consensus GTGGGCTATTCTATGGGAATGCTTTCACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
 
. : . : . : . : . : . :
rJMSF037J06+ TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
rJMSF003G24+ TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
                      ____________________________________________________________
consensus TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
 
. : . : . : . : . : . :
rJMSF037J06+ ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
rJMSF003G24+ ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
                      ____________________________________________________________
consensus ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
 
. : . : . : . : . : . :
rJMSF037J06+ AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
rJMSF003G24+ AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
                      ____________________________________________________________
consensus AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
 
. : . : . : . : . : . :
rJMSF037J06+ AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
rJMSF003G24+ AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
                      ____________________________________________________________
consensus AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
 
. : . : . : . : . : . :
rJMSF037J06+ ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
rJMSF003G24+ ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
                      ____________________________________________________________
consensus ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
 
. : . : . : . : . : . :
rJMSF037J06+ AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
rJMSF003G24+ AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
                      ____________________________________________________________
consensus AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
 
. : . : . : . : . : . :
rJMSF037J06+ CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
rJMSF003G24+ CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
                      ____________________________________________________________
consensus CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
 
. : . : . : . : . : . :
rJMSF037J06+ TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
rJMSF003G24+ TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
                      ____________________________________________________________
consensus TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
 
. : . : . : . : . : . :
rJMSF037J06+ GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
rJMSF003G24+ GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
                      ____________________________________________________________
consensus GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
 
. : . : . : . : . : . :
rJMSF037J06+ CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
rJMSF003G24+ CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
                      ____________________________________________________________
consensus CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
 
. : . : . : . : . : . :
rJMSF037J06+ CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
rJMSF003G24+ CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
                      ____________________________________________________________
consensus CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
 
. : . : . : . : . : . :
rJMSF037J06+ TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTAC
rJMSF003G24+ TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTACCTGTATCTTTTCCTGTGA
                      ____________________________________________________________
consensus TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTACCTGTATCTTTTCCTGTGA