Contig 011204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K24Sequence338003296 (4)631011204 (3)gb|KDO87040.1|8e-29hypothetical protein CISIN_1g004536mg [Citrus sinensis]
JMFF034I08Sequence516003296 (4)ref|XP_009788474.1|56.2PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris]716011204 (3)ref|XP_002515304.1|9e-41triacylglycerol lipase, putative [Ricinus communis] gb|EEF47288.1| triacylglycer
JMFF047P04Sequence570003296 (4)ref|XP_009788474.1|56.2PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris]566011204 (3)gb|KDO87040.1|1e-13hypothetical protein CISIN_1g004536mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF034I08+ TCGTCCCCCCGTGACAGATG
                      ____________________________________________________________
consensus TCGTCCCCCCGTGACAGATG
 
. : . : . : . : . : . :
rJMFF034I08+ ACGATGATGCAGAGAAACGAATCCTAGCTGCAAAGACCGCGTTCCTAAACTCCCCACATC
                      ____________________________________________________________
consensus ACGATGATGCAGAGAAACGAATCCTAGCTGCAAAGACCGCGTTCCTAAACTCCCCACATC
 
. : . : . : . : . : . :
rJMFF034I08+ CTCTCGAGATCCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
rJMFF003K24+ CCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
                      ____________________________________________________________
consensus CTCTCGAGATCCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
 
. : . : . : . : . : . :
rJMFF034I08+ ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
rJMFF003K24+ ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
rJMFF047P04+ CATCATTCATGTAGAGCTCAGCCGCA
                      ____________________________________________________________
consensus ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
 
. : . : . : . : . : . :
rJMFF034I08+ TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
rJMFF003K24+ TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
rJMFF047P04+ TCCGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
                      ____________________________________________________________
consensus TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
 
. : . : . : . : . : . :
rJMFF034I08+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
rJMFF003K24+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
rJMFF047P04+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
                      ____________________________________________________________
consensus CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
 
. : . : . : . : . : . :
rJMFF034I08+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
rJMFF003K24+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
rJMFF047P04+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
                      ____________________________________________________________
consensus GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
 
. : . : . : . : . : . :
rJMFF034I08+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
rJMFF003K24+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
rJMFF047P04+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
                      ____________________________________________________________
consensus TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
 
. : . : . : . : . : . :
rJMFF034I08+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
rJMFF003K24+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
rJMFF047P04+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
                      ____________________________________________________________
consensus TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
 
. : . : . : . : . : . :
rJMFF034I08+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
rJMFF003K24+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
rJMFF047P04+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
                      ____________________________________________________________
consensus TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
 
. : . : . : . : . : . :
rJMFF034I08+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
rJMFF003K24+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
rJMFF047P04+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
                      ____________________________________________________________
consensus TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
 
. : . : . : . : . : . :
rJMFF034I08+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
rJMFF003K24+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
rJMFF047P04+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
                      ____________________________________________________________
consensus AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
 
. : . : . : . : . : . :
rJMFF034I08+ CACATGCATGCATTGATGCATACCTATATAT
rJMFF003K24+ CACATGCATGCATTGATGCATACCTATATAT
rJMFF047P04+ CACATGCATGCATTGATGCATACCTATATATTGAAACCAAGTTGTCCTCGTGGGAAAAAT
                      ____________________________________________________________
consensus CACATGCATGCATTGATGCATACCTATATATTGAAACCAAGTTGTCCTCGTGGGAAAAAT