Contig 011019:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A24Sequence547011019 (23)ref|XP_009614692.1|163PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]715011019 (23)ref|XP_009614692.1|299PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMFF015F04Sequence566010775 (2)ref|XP_009614692.1|182PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]772011019 (23)ref|XP_009614692.1|269PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMFF042H06Sequence645011019 (23)ref|XP_009614692.1|222PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]612011019 (23)ref|XP_006363989.1|233PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF001F07Sequence743011019 (23)ref|XP_006363989.1|348PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF001G07Sequence319011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]747011019 (23)ref|XP_006363989.1|348PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF003M04Sequence320011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]687011019 (23)ref|XP_009614692.1|297PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF017A06Sequence321011019 (23)ref|XP_009614692.1|48.9PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]798011019 (23)ref|XP_006363989.1|350PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF023N03Sequence678011019 (23)ref|XP_009614692.1|217PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]770011019 (23)ref|XP_009780705.1|254PREDICTED: uncharacterized protein LOC104229716 [Nicotiana sylvestris] ref|XP_00
JMSF024B11Sequence700011019 (23)ref|XP_009614692.1|244PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]758011019 (23)ref|XP_009614692.1|349PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF029J11Sequence692011019 (23)ref|XP_009614692.1|237PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]786011019 (23)ref|XP_006363989.1|330PREDICTED: uncharacterized protein LOC102601007 [Solanum tuberosum]
JMSF032B05Sequence682010775 (2)ref|XP_009614692.1|246PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]686011019 (23)ref|XP_009614692.1|297PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF038D20Sequence692011019 (23)ref|XP_009614692.1|237PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]911011019 (23)ref|XP_009614692.1|358PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]
JMSF046J17Sequence779011019 (23)ref|XP_009614692.1|257PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]683011019 (23)ref|XP_009614692.1|295PREDICTED: uncharacterized protein LOC104107561 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF023N03- GCATAGATATAAGCCTTACC
JMSF046J17- GTAGCATAGATATAAGCCTTACC
                      ____________________________________________________________
consensus GTAGCATAGATATAAGCCTTACC
 
. : . : . : . : . : . :
JMSF024B11- GGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF029J11- GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF003M04- GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF001G07- GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF038D20- GACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF023N03- GACTACCGACTCCTTACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMFF042H06- CGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMFF002A24- CGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF017A06- GGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
JMSF046J17- GACTACCGACTCCTTACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
                      ____________________________________________________________
consensus GACTACCGACTCCTGACGGCTTACGCTCAGATATTTCCGCCGGAGCTGTGTCATTGACCG
 
. : . : . : . : . : . :
JMSF024B11- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF029J11- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF003M04- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF001G07- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF038D20- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF023N03- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMFF042H06- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMFF002A24- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF017A06- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
JMSF046J17- CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
                      ____________________________________________________________
consensus CCGGAAGAGGTACACAGCCAAAACATCAAACACATAAACCAATTCGTCATTGTTGCTGCA
 
. : . : . : . : . : . :
JMSF024B11- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF029J11- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF003M04- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF001G07- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF038D20- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF023N03- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMFF042H06- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMFF002A24- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF017A06- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
JMSF046J17- TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
                      ____________________________________________________________
consensus TGATGGAGATGACAACTTCTCTTCGATCTTCTATCACCGTCGGTTGCGGACCTGTCAAGT
 
. : . : . : . : . : . :
JMSF024B11- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF029J11- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF003M04- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF001G07- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF038D20- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF023N03- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMFF042H06- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMFF002A24- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF017A06- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
JMSF046J17- CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
                      ____________________________________________________________
consensus CCGGTCGCCGTTTCACGACAGACGCGCCCGGGTTTGTTAAATTCGGATCCAAAGCTCTTC
 
. : . : . : . : . : . :
JMSF024B11- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF029J11- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF003M04- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF001G07- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF038D20- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF023N03- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMFF042H06- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMFF002A24- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF017A06- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
JMSF046J17- TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
                      ____________________________________________________________
consensus TATCTGCACCTTCAATCAAGGTAAAGTTGGGCAACAGAAGAGTGGCATTTGGGAGCACAA
 
. : . : . : . : . : . :
JMSF024B11- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF029J11- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF003M04- AATGCAACTCCATTCGTGCATCATTGCCACTTTC
JMSF001G07- AATGCAACTCCATTCGTGCATCATTGCCACTTT
JMSF038D20- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF023N03- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMFF042H06- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMFF002A24- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
JMSF017A06- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAA
JMSF046J17- AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
                      ____________________________________________________________
consensus AATGCAACTCCATTCGTGCATCATTGCCACTTTCAAATTCAGGGGGCTCAGCCATGCCTA
 
. : . : . : . : . : . :
JMSF024B11- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF029J11- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF038D20- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF023N03- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMFF042H06- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMFF002A24- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
JMSF046J17- TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
                      ____________________________________________________________
consensus TTGCTCCACTTAAGTTGGAATCTCCAATTGGACAATTTCTCACACAAATTTTGGTAAGTC
 
. : . : . : . : . : . :
JMSF024B11- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF029J11- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF038D20- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF023N03- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMFF042H06- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMFF002A24- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
JMSF046J17- ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
                      ____________________________________________________________
consensus ATCCACATCTTGTGTCGGCTGCAGTAGATCAGCAACTTGAGCAGCTTCAGACTGACCGTA
 
. : . : . : . : . : . :
JMSF024B11- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF029J11- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF038D20- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF023N03- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMFF042H06- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMFF002A24- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
JMSF046J17- ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
                      ____________________________________________________________
consensus ATTTAGAGAAGCAGAATGAGAAGCAGAATGATGAGCCATCTGCATCTGGCACTGACATAG
 
. : . : . : . : . : . :
JMSF024B11- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF029J11- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF038D20- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMSF023N03- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMFF042H06- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
JMFF002A24- TTCTGTACAGGAGAATTGCTGA
JMSF046J17- TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
rJMSF038D20+ TGAGGTCAAGGCCNATGAAAGAAGAAAAGCCCTGGAAGAGA
                      ____________________________________________________________
consensus TTCTGTACAGGAGAATTGCTGAGGTCAAGGCCAATGAAAGAAGAAAAGCCCTGGAAGAGA
 
. : . : . : . : . : . :
JMSF024B11- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF029J11- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF038D20- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF023N03- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTTGGTTCC
JMFF042H06- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
JMSF046J17- TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
rJMSF038D20+ TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTTNGGTTCCGGCC
                      ____________________________________________________________
consensus TTCTGTATGCCTTGGTGGTGCAGAAATTCATGGATGCTGATGTACCTTT-GGTTCCGGCC
 
. : . : . : . : . : . :
JMSF024B11- ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGAT
JMSF029J11- ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCC
JMSF038D20- ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCC
JMSF046J17- ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF017A06+ TTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF024B11+ TCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF001G07+ TTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF001F07+ TTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF038D20+ ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
rJMSF029J11+ CTGGTAGTATTGATACCNTGCCAAGCAAAGATGAG
                      ____________________________________________________________
consensus ATAACTTCTCCTTCGCAAAATTCTTCTGGTAGTATTGATACCTTGCCAAGCAAAGATGAG
 
. : . : . : . : . : . :
JMSF046J17- CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGA
rJMSF017A06+ CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF024B11+ CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF001G07+ CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF001F07+ CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF038D20+ CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
rJMSF029J11+ CAGC-TGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
                      ____________________________________________________________
consensus CAGCTTGCACGGCTTCATTCACCTGAAGCTTATGAGATGATCCAGAATCACCTCTCTCTC
 
. : . : . : . : . : . :
rJMSF017A06+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF024B11+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF001G07+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF001F07+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF038D20+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF029J11+ ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF032B05+ GGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF003M04+ GGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF046J17+ GAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMFF002A24+ CTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
rJMSF023N03+ AGTTAAGAGTTGGC
                      ____________________________________________________________
consensus ATTCTGGGAAATAGATCCAATGCCAATAGCTCGGTTCAAATAAACAAGTTAAGAGTTGGC
 
. : . : . : . : . : . :
rJMSF017A06+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF024B11+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF001G07+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF001F07+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF038D20+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF029J11+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF032B05+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF003M04+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF046J17+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMFF002A24+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMSF023N03+ CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
rJMFF015F04+ TGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
                      ____________________________________________________________
consensus CAAGTCTATGCTGCATCAGTTATGTATGGTTACTTCCTTAAGCGAGTTGACCAGAGATTC
 
. : . : . : . : . : . :
rJMSF017A06+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF024B11+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF001G07+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF001F07+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF038D20+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF029J11+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF032B05+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF003M04+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF046J17+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF002A24+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMSF023N03+ CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF042H06+ TTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
rJMFF015F04+ CAGCTTGAAAAGAACATGAAAGTCNTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
                      ____________________________________________________________
consensus CAGCTTGAAAAGAACATGAAAGTCCTTCCGCAGGGTTTAGATAAAGAAGATAGTGGCATT
 
. : . : . : . : . : . :
rJMSF017A06+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF024B11+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF001G07+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF001F07+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF038D20+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF029J11+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF032B05+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF003M04+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF046J17+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF002A24+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMSF023N03+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF042H06+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
rJMFF015F04+ CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
                      ____________________________________________________________
consensus CAGCAAGTTGGGGGTGATAGCAGTGATACGTCTTTGAGGTCTTCACCATCCCATCCTGAA
 
. : . : . : . : . : . :
rJMSF017A06+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF024B11+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF001G07+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF001F07+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF038D20+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF029J11+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF032B05+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF003M04+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF046J17+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF002A24+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMSF023N03+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF042H06+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
rJMFF015F04+ GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
                      ____________________________________________________________
consensus GTGGTTTCATGGCCTGATGGTGGGATGGGTTCCAGGGGTTTTGGCACCGAAATGAAACCC
 
. : . : . : . : . : . :
rJMSF017A06+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF024B11+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF001G07+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF001F07+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF038D20+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF029J11+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF032B05+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF003M04+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF046J17+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF002A24+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMSF023N03+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF042H06+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
rJMFF015F04+ TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
                      ____________________________________________________________
consensus TCGAGACTGAGAACCTATGTGATGTCATTTGATGGGGAGACTCTTCAGAGATATGCAACC
 
. : . : . : . : . : . :
rJMSF017A06+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF024B11+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF001G07+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF001F07+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF038D20+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF029J11+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF032B05+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF003M04+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF046J17+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF002A24+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMSF023N03+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF042H06+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
rJMFF015F04+ ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
                      ____________________________________________________________
consensus ATCAGATCTAAAGAGGCCATAAATATCATCGAGAAACACACCGAAGCATTGTTTGGTAGA
 
. : . : . : . : . : . :
rJMSF017A06+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF024B11+ CCTGAGATCAGCATCACACCCCAAGGTACCAGTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF001G07+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF001F07+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF038D20+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF029J11+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF032B05+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF003M04+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF046J17+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF002A24+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMSF023N03+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF042H06+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
rJMFF015F04+ CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
                      ____________________________________________________________
consensus CCTGAGATCAGCATCACACCCCAAGGTACCATTGACTCTTCCAAAGATGAACTCATTAAA
 
. : . : . : . : . : . :
rJMSF017A06+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF024B11+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF001G07+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF001F07+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF038D20+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF029J11+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF032B05+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF003M04+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF046J17+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMFF002A24+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMSF023N03+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCC--
rJMFF042H06+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
rJMFF015F04+ ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
                      ____________________________________________________________
consensus ATTAGCTTCAGCAGTCTCAGGAGGCTCGTTTTGGAGGCCGTAACCTTTGGGTCTTTCCTG
 
. : . : . : . : . : . :
rJMSF017A06+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF024B11+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF001G07+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF001F07+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF038D20+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF029J11+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF032B05+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF003M04+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF046J17+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF002A24+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMSF023N03+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF042H06+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
rJMFF015F04+ TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
                      ____________________________________________________________
consensus TGGGACGTGGAGAGCTCTGTGGATTCTAGGTACCATTTTGTTGCTCATTGAACATTGTGG
 
. : . : . : . : . : . :
rJMSF017A06+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF024B11+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTA
rJMSF001G07+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTAT
rJMSF001F07+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTA
rJMSF038D20+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF029J11+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF032B05+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF003M04+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF046J17+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF002A24+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMSF023N03+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF042H06+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
rJMFF015F04+ TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
                      ____________________________________________________________
consensus TGCTCCATGCTTGAGATTTAACTTAGTCAAATTCTGTAAAAAACTATGGACCACGGATCG
 
. : . : . : . : . : . :
rJMSF017A06+ CATGCCAATCAATTTGTACATAGTGACCA
rJMSF038D20+ CATGCCAATCAATTTGTACATAGTGACCAT
rJMSF029J11+ CATGCCAATCAATTTGTACATAGTGACCATTT
rJMSF032B05+ CATGCCAATCAATTTGTACATAGTGACCATTT
rJMSF003M04+ CATGCCAATCAATTTGTACATAGTGACCATTT
rJMSF046J17+ CATGCCAATCAATTTGTACATAGTGACCAT
rJMFF002A24+ CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTA
rJMSF023N03+ CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
rJMFF042H06+ CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
rJMFF015F04+ CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
                      ____________________________________________________________
consensus CATGCCAATCAATTTGTACATAGTGACCATTTTCAGTAACGTCCTGGTTATAACAGTATT
 
. : . : . : . : . : . :
rJMSF023N03+ TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
rJMFF042H06+ TGATTTGATTTTTGGT
rJMFF015F04+ TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
                      ____________________________________________________________
consensus TGATTTGATTTTTGGTAGCAGCTAGCAGTCTACAGCCTAGTATAGACTAGCAATTGTTTG
 
. : . : . : . : . : . :
rJMSF023N03+ GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAG
rJMFF015F04+ GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAGGGATTCGTCTTATTGAATTAAG
                      ____________________________________________________________
consensus GTAATTTGATTGTGTGTTTTTGATAACGCAAGAAGAAGGGATTCGTCTTATTGAATTAAG