Contig 011016:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014M04Sequence502003495 (25)ref|XP_011073820.1|3e-23PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A746011016 (8)emb|CAN70282.1|8e-103hypothetical protein VITISV_023081 [Vitis vinifera]
JMFF047P24Sequence566003495 (25)ref|XP_011073820.1|2e-55PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A150011016 (8)
JMFN016J06Sequence608011016 (8)emb|CAN70282.1|1e-115hypothetical protein VITISV_023081 [Vitis vinifera]
JMFS078C07Sequence614011016 (8)emb|CDP14623.1|2e-99unnamed protein product [Coffea canephora]
JMFS128A09Sequence635011016 (8)ref|XP_009589224.1|7e-71PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A
JMFS164D06Sequence512011016 (8)ref|XP_004247993.1|3e-68PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A
JMSF011D23Sequence386003495 (25)ref|XP_006395381.1|4e-16hypothetical protein EUTSA_v10003580mg [Eutrema salsugineum] gb|ESQ32667.1| hypo682011016 (8)emb|CAN70282.1|3e-115hypothetical protein VITISV_023081 [Vitis vinifera]
JMSF043P17Sequence721003495 (25)ref|XP_011073820.1|2e-55PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A546011016 (8)ref|XP_006364689.1|1e-83PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase A

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS128A09- AGTGCGTTAATTGGGGAGATTCC
                      ____________________________________________________________
consensus AGTGCGTTAATTGGGGAGATTCC
 
. : . : . : . : . : . :
JMFS128A09- AGAGGATATATGTGAATCTGGCAGCCTGGGAATTCTGCAGCTTGATGGGAATTCATTGAC
                      ____________________________________________________________
consensus AGAGGATATATGTGAATCTGGCAGCCTGGGAATTCTGCAGCTTGATGGGAATTCATTGAC
 
. : . : . : . : . : . :
JMFS128A09- TGGCACTATTCCTCCTCAGATTGGAAATTGCTCCTCTCTCACCTTGCTGAGCTTATCACA
                      ____________________________________________________________
consensus TGGCACTATTCCTCCTCAGATTGGAAATTGCTCCTCTCTCACCTTGCTGAGCTTATCACA
 
. : . : . : . : . : . :
JMFS128A09- CAATAATTTAAGTGGCACCATACCTGAGACCCTTTCAATGCTGAAAAGGCTGAAGATTCT
                      ____________________________________________________________
consensus CAATAATTTAAGTGGCACCATACCTGAGACCCTTTCAATGCTGAAAAGGCTGAAGATTCT
 
. : . : . : . : . : . :
JMFS128A09- GAAGCTAGAGGTTAACCAACTGAGTGGAGAAATACCCCAACAGCTGGGCAAACTGGAAAA
                      ____________________________________________________________
consensus GAAGCTAGAGGTTAACCAACTGAGTGGAGAAATACCCCAACAGCTGGGCAAACTGGAAAA
 
. : . : . : . : . : . :
JMFS128A09- CCTTCTGGCAGTGAATGTATCCTACAACAGGCTCACAGGCCGGCTTCCGGCTGGGAGTAT
                      ____________________________________________________________
consensus CCTTCTGGCAGTGAATGTATCCTACAACAGGCTCACAGGCCGGCTTCCGGCTGGGAGTAT
 
. : . : . : . : . : . :
JMFS128A09- ATTCCAGAATCTAGACTCCAGTGCAATAGAGGGGAATGATGGGATTTGTTCCCCCTTATT
                      ____________________________________________________________
consensus ATTCCAGAATCTAGACTCCAGTGCAATAGAGGGGAATGATGGGATTTGTTCCCCCTTATT
 
. : . : . : . : . : . :
JMFS128A09- GACAGGACCCTGCAAAATGAATGCCCCAAAACCTATAGTCATCAACCCCTTTGTTTATGG
                      ____________________________________________________________
consensus GACAGGACCCTGCAAAATGAATGCCCCAAAACCTATAGTCATCAACCCCTTTGTTTATGG
 
. : . : . : . : . : . :
JMFS128A09- AAACCAGACTGACAATAATAATGGGGGGGATAATAATGAGCCTCTGGCAAGTACCAGGAA
                      ____________________________________________________________
consensus AAACCAGACTGACAATAATAATGGGGGGGATAATAATGAGCCTCTGGCAAGTACCAGGAA
 
. : . : . : . : . : . :
JMFS128A09- CTCAAGGCACCATAGATTCCTCAGTGTTTCAGCCATAGTTGCAATCTCAGCTGCAGCCAT
                      ____________________________________________________________
consensus CTCAAGGCACCATAGATTCCTCAGTGTTTCAGCCATAGTTGCAATCTCAGCTGCAGCCAT
 
. : . : . : . : . : . :
JMFS128A09- CATTGCAGTTGGTGTGATGGTGATAACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
JMFS078C07- ACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
                      ____________________________________________________________
consensus CATTGCAGTTGGTGTGATGGTGATAACCATGGTGAATGCCTCGGTTAGGAGGCGGATTTC
 
. : . : . : . : . : . :
JMFS128A09- GTTCGTGGAAAA
JMFS078C07- GTTCGTGGAAAACGCGTTGGAGAGCATGTGCTCCTCCACCTCTTCAAGGTCCCAAGGCAT
                      ____________________________________________________________
consensus GTTCGTGGAAAACGCGTTGGAGAGCATGTGCTCCTCCACCTCTTCAAGGTCCCAAGGCAT
 
. : . : . : . : . : . :
JMFS078C07- GGCTACTGGGAAGCTGATCCTATTCGACACGAAATCGTCCCCGGATTGGGCGAGCAGCAC
                      ____________________________________________________________
consensus GGCTACTGGGAAGCTGATCCTATTCGACACGAAATCGTCCCCGGATTGGGCGAGCAGCAC
 
. : . : . : . : . : . :
JMFS078C07- CTTCGAATCGGTGCTGAACAAGGCATCAGAAATCGGGGAAGGCGTTTTCGGGACCGTTTA
                      ____________________________________________________________
consensus CTTCGAATCGGTGCTGAACAAGGCATCAGAAATCGGGGAAGGCGTTTTCGGGACCGTTTA
 
. : . : . : . : . : . :
JMFS078C07- CAAGGCTCCACTGGGAGGTGAAGGCAGCAGAGTGGTGGCAATAAAGAAGCTCACAAGCTC
                      ____________________________________________________________
consensus CAAGGCTCCACTGGGAGGTGAAGGCAGCAGAGTGGTGGCAATAAAGAAGCTCACAAGCTC
 
. : . : . : . : . : . :
JMFS078C07- AAAGATTTTGCAGTACCCGGAGGACTTTGATCGCGAGGTTCGAGTTCTGGGGAAAGCCAG
                      ____________________________________________________________
consensus AAAGATTTTGCAGTACCCGGAGGACTTTGATCGCGAGGTTCGAGTTCTGGGGAAAGCCAG
 
. : . : . : . : . : . :
JMFS078C07- GCACCAGAATTTGGTCCCCTTGAGAGGCTATTACTGGACTCCTCAGCTCCAGCTTTTAGT
                      ____________________________________________________________
consensus GCACCAGAATTTGGTCCCCTTGAGAGGCTATTACTGGACTCCTCAGCTCCAGCTTTTAGT
 
. : . : . : . : . : . :
JMFS078C07- TTCAGATTTTGTGCCATTAGGGAACTTGGAATCAAAGCTCCATGAAATGGCAATGGCAAT
JMFN016J06- T
rJMSF011D23+ T
                      ____________________________________________________________
consensus TTCAGATTTTGTGCCATTAGGGAACTTGGAATCAAAGCTCCATGAAATGGCAATGGCAAT
 
. : . : . : . : . : . :
JMFS078C07- GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
JMFN016J06- GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
rJMSF011D23+ GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
rJMFF014M04+ AAGATTATATTGGGAACTGCAAAGGG
                      ____________________________________________________________
consensus GGCAACTCCTCCATTAACATGGGCAGTTAGGTTCAAGATTATATTGGGAACTGCAAA-GG
 
. : . : . : . : . : . :
JMFS078C07- GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
JMFN016J06- GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
rJMSF011D23+ GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
rJMFF014M04+ GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
                      ____________________________________________________________
consensus GGCTAGCACATTTGCACCATTCTTGCCAGCCCCCAATCATACACTACAACATCAAGCCCA
 
. : . : . : . : . : . :
JMFS078C07- GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTC
JMFN016J06- GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMSF043P17+ CCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMSF011D23+ GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
rJMFF014M04+ GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
                      ____________________________________________________________
consensus GCAATATTCTCCTGGACGAAAACCTGAACCCGAAAATCTCAGACTTCGGGCTGGCAAGGC
 
. : . : . : . : . : . :
JMFN016J06- TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
rJMSF043P17+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
rJMSF011D23+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
JMFS164D06- CGGCGATAGGGTACG
rJMFF014M04+ TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
                      ____________________________________________________________
consensus TGGTGGCAAAGCTGGACAGGCACGTGATGAGCAACCGGTTCCAGGCGGCGATAGGGTACG
 
. : . : . : . : . : . :
JMFN016J06- TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMSF043P17+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMSF011D23+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
JMFS164D06- TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
rJMFF014M04+ TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
                      ____________________________________________________________
consensus TGGCGCCCGAGCTGGCGTGCCAGAGCCTGAGAGTGAACGAGAAGTGCGACGTGTATGGGT
 
. : . : . : . : . : . :
JMFN016J06- TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMSF043P17+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMSF011D23+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
JMFS164D06- TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
rJMFF014M04+ TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
                      ____________________________________________________________
consensus TCGGGATGCTGATACTGGAGATTGTGACGGGGAGGAGGCCGGTGGAGTATGGGGAGGACA
 
. : . : . : . : . : . :
JMFN016J06- ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMSF043P17+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMSF011D23+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
JMFS164D06- ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
rJMFF014M04+ ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
                      ____________________________________________________________
consensus ATGTTTTGATCCTGAATGATCATGTGAGGGTGTTGCTTGAGCAAGGGAATGTGTTGGAGT
 
. : . : . : . : . : . :
JMFN016J06- GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMSF043P17+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMSF011D23+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
JMFS164D06- GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
rJMFF014M04+ GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
                      ____________________________________________________________
consensus GTGTGGATCAGGGGATGGGTGGGTACCCTGATGAGGAAGTGTTGCCTGTTTTGAAGCTGG
 
. : . : . : . : . : . :
JMFN016J06- CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMSF043P17+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMSF011D23+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
JMFS164D06- CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
rJMFF014M04+ CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
                      ____________________________________________________________
consensus CTTTGGTGTGTACTTCCCAGATACCTTCGAGCAGGCCTTCCATGGCGGAAGTGGTGCAGA
 
. : . : . : . : . : . :
JMFN016J06- TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMSF043P17+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMSF011D23+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMFF047P24+ TACTGAGCCTCAGCCT
JMFS164D06- TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
rJMFF014M04+ TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
                      ____________________________________________________________
consensus TCTTGCAGGTTATCAAGACTCCTGTTCCAAACAGAATGGAACCATACTGAGCCTCAGCCT
 
. : . : . : . : . : . :
JMFN016J06- CTGGACTG
rJMSF043P17+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMSF011D23+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMFF047P24+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
JMFS164D06- CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
rJMFF014M04+ CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
                      ____________________________________________________________
consensus CTGGACTGGAGTCTGGAAATATTCTTGAATTCACTTAAGCTTAGCTAGCATATATTTTTC
 
. : . : . : . : . : . :
rJMSF043P17+ CGACATCCC
rJMSF011D23+ CGACATCCCAGTCTT
rJMFF047P24+ CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAAAATAATT
JMFS164D06- CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
rJMFF014M04+ CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
                      ____________________________________________________________
consensus CGACATCCCAGTCTTTGTTCTTTTATTCTCTTGGTTTGGACGTTATAATATAATATAATT
 
. : . : . : . : . : . :
rJMFF047P24+ GCTTTGGTAATTGT
JMFS164D06- GCTTTGGTAATTGT
rJMFF014M04+ GCTTTGGTAATTGTATCATCACTCGTTCCGCTTGCTTACTTTGTAACATTTAGAATCACC
                      ____________________________________________________________
consensus GCTTTGGTAATTGTATCATCACTCGTTCCGCTTGCTTACTTTGTAACATTTAGAATCACC