Contig 010157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A07Sequence558010157 (6)gb|KDP26595.1|9e-62hypothetical protein JCGZ_17753 [Jatropha curcas]709002713 (6)ref|XP_004297483.1|8e-66PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF012F03Sequence443010157 (6)gb|KDP26595.1|1e-39hypothetical protein JCGZ_17753 [Jatropha curcas]777002713 (6)ref|XP_004297483.1|4e-85PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF036O12Sequence530010157 (6)ref|XP_009762378.1|3e-72PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]710002713 (6)ref|XP_004297483.1|2e-68PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMFF046P03Sequence645010157 (6)ref|XP_009762378.1|9e-85PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]514002713 (6)gb|KJB31218.1|1e-20hypothetical protein B456_005G181700 [Gossypium raimondii]
JMFF047P21Sequence632010157 (6)ref|XP_009762378.1|1e-78PREDICTED: probable nucleoredoxin 1 [Nicotiana sylvestris]612002713 (6)ref|XP_004297483.1|1e-29PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]
JMSF002D07Sequence256010157 (6)ref|XP_010023554.1|7e-16PREDICTED: probable nucleoredoxin 1 isoform X6 [Eucalyptus grandis] gb|KCW59848.721002713 (6)ref|XP_004297483.1|1e-75PREDICTED: probable nucleoredoxin 1 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


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JMFF046P03+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMFF047P21+                       TAGTCACGTGATGTCGAAACTAGGACAGTCTTCAAAGATTGTTCCCTC
JMFF046P03+           GCTGCAATCACATAGTCACGTGATGTCGAAACTAGGACAGTTTCNAAAGATNGTTCCCTC
                      ____________________________________________________________
consensus             GCTGCAATCACATAGTCACGTGATGTCGAAACTAGGACAGTTTTCAAAGATTGTTCCCTC
 
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JMFF047P21+           TNAGCTGCATCTTCCGCATCTNTGATTTCTTTGACCCTCTCTAGAGTAAAAGGGTAAGCT
JMFF036O12+                                                          AAAAGGGTAAGCT
JMFF046P03+           TAGCTGCATTCTTCTGCATCTTTGATNTCTNTGACCCTCTCTAGAGTAAAAGGGTAAGCT
                      ____________________________________________________________
consensus             TAGGTTGCTTCTTCTGCATCTTTGATTTCTTTGACCCTCTCTAGAGTAAAAGGGTAAGCT
 
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JMFF047P21+           TCCACCCCATGCTCAAGGACAATATCAACGCCATCTTCAGTTGTTACTTTTCCACTTTCA
JMFF036O12+           TCCACCCCATGCTCAAGGACAATATCAACGCCATCTTCAGTTGTTACTTTTCCACTTTCA
JMFF046P03+           TCCACCCCATGCTCAAGGACAATATCAACGCCATCTTCAGTTGTTACTTTTCCACTTTCA
JMFF007A07+                                                     GTTACTTTTCCACTTTCA
                      ____________________________________________________________
consensus             TCCACCCCATGCTCAAGGACAATATCAACGCCATCTTCAGTTGTTACTTTTCCACTTTCA
 
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JMFF047P21+           TCAAGGATCACAAGGTGGGGTATTCCCCTAACAGTGAATAATGCATCCAGCCGTTCACGA
JMFF036O12+           TCAAGGATCACAAGGTGGGGTATTCCCCTAACAGTGAATAATGCATCCAGCCGTTCACGA
JMFF046P03+           TCAAGGATCACAAGGTGGGGTATTCCCCTAACAGTGAATAATGCATCCAGCCGTTCACGA
JMFF007A07+           TCAAGGATCACAAGGTGGGGTATTCCCCTAACAGTGAATAATGCATCCAGCCGTTCACGA
                      ____________________________________________________________
consensus             TCAAGGATCACAAGGTGGGGTATTCCCCTAACAGTGAATAATGCATCCAGCCGTTCACGA
 
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JMFF047P21+           GTGACAGAATCAGAGAATGGGACTGCAGTCCAAGGCATTTTACCAAAGTATTCCTTAAAA
JMFF036O12+           GTGACAGAATCAGAGAATGGGACTGCAGTCCAAGGCATTTTACCAAAGTATTCCTTAAAA
JMFF046P03+           GTGACAGAATCAGAGAATGGGACTGCAGTCCAAGGCATTTTACCAAAGTATTCCTTAAAA
JMFF012F03+                                                TTTTACCAAAGTATTCCTTAAAA
JMFF007A07+           GTGACAGAATCAGAGAATGGGACTGCAGTCCAAGGCATTTTACCAAAGTATTCCTTAAAA
                      ____________________________________________________________
consensus             GTGACAGAATCAGAGAATGGGACTGCAGTCCAAGGCATTTTACCAAAGTATTCCTTAAAA
 
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JMFF047P21+           GATCCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
JMFF036O12+           GATTCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
JMFF046P03+           GATTCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
JMFF012F03+           GATTCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
JMFF007A07+           GATTCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
                      ____________________________________________________________
consensus             GATTCCTCATCCTCATCAGCAGACACAAATACAACTTCAAAGTTGCCTTTGGGAAGGAGT
 
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JMFF047P21+           TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
JMFF036O12+           TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
JMSF002D07+                                    GGGTGAATCGATGGCAAGGACCACACCACGATGCT
JMFF046P03+           TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
JMFF012F03+           TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
JMFF007A07+           TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
                      ____________________________________________________________
consensus             TCATTATACACTGTTGCTAAATTTGGGGTGAATCGATGGCAAGGACCACACCACGATGCT
 
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JMFF047P21+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
JMFF036O12+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
JMSF002D07+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
JMFF046P03+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
JMFF012F03+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
JMFF007A07+           GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
                      ____________________________________________________________
consensus             GAGAAGTATATCCCAATCTTCTTCCCCTTCAAATCATCAACTTTAACCTGATGACCGCTG
 
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JMFF047P21+           TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
JMFF036O12+           TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
JMSF002D07+           TTCCGAATCAGAAAATCTCCGTCTGAAGAG-AGAGGATCGATCGGAGGTCGTGTGCATCG
JMFF046P03+           TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
JMFF012F03+           TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
JMFF007A07+           TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
                      ____________________________________________________________
consensus             TTCCGAATCAGAAAATCTCTGTCTGAAGAGCAGAGGATCGATCGGAGGTCGTGTGCATCG
 
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JMFF047P21+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
JMFF036O12+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
JMSF002D07+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
JMFF046P03+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
JMFF012F03+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
JMFF007A07+           CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
                      ____________________________________________________________
consensus             CCGTTCTGCTCCGCCATTGAAGATGCTTTTCTCTCTTCTCCTTTTCGCTTACTGAACTGG
 
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JMFF047P21+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGCGAT                
JMFF036O12+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACT                       
JMSF002D07+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGC                   
JMFF046P03+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGCGAT                
JMFF012F03+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGCGATGGAACGAAGAACGGAA
JMFF007A07+           AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGCGATGGAACGAAGAACGGAA
                      ____________________________________________________________
consensus             AAGATTGATTATCTGAGTAAGAAAGTTGAGAGAAACTGAGCGATGGAACGAAGAACGGAA
 
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JMFF012F03+           TGCGATGCTTTAAAAGGCTTCCACTGGTCTGCGTAGAGACGACGAAGACTGCACCAAGTC
JMFF007A07+           TGCGATGCTTTAAAAGGCTTCCACTGGTCTGCGTAGAGACGACGAAGACTGCACCAAGTC
                      ____________________________________________________________
consensus             TGCGATGCTTTAAAAGGCTTCCACTGGTCTGCGTAGAGACGACGAAGACTGCACCAAGTC