Contig 009912:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N14Sequence281009912 (10)253009912 (10)
JMFF019E03Sequence526008786 (7)ref|XP_009359892.1|1e-07PREDICTED: uncharacterized protein LOC103950414 isoform X2 [Pyrus x bretschneid673009912 (10)ref|XP_003536819.1|1e-84PREDICTED: myosin heavy chain, skeletal muscle-like [Glycine max] gb|KHN37247.1
JMFF022M14Sequence471008786 (7)786009912 (10)ref|XP_011086869.1|362PREDICTED: uncharacterized protein LOC105168472 [Sesamum indicum]
JMFF026A05Sequence281009912 (10)256009912 (10)
JMSF005C13Sequence314008786 (7)417009912 (10)ref|XP_011086869.1|179PREDICTED: uncharacterized protein LOC105168472 [Sesamum indicum]
JMSF007I23Sequence267008786 (7)732009912 (10)ref|XP_011086869.1|296PREDICTED: uncharacterized protein LOC105168472 [Sesamum indicum]
JMSF010E04Sequence347008786 (7)685009912 (10)ref|XP_011086869.1|256PREDICTED: uncharacterized protein LOC105168472 [Sesamum indicum]
JMSF030B17Sequence690008786 (7)ref|XP_010100044.1|8e-11hypothetical protein L484_013156 [Morus notabilis] gb|EXB81215.1| hypothetical p786009912 (10)ref|XP_011086869.1|377PREDICTED: uncharacterized protein LOC105168472 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030B17+ GA
                      ____________________________________________________________
consensus GA
 
. : . : . : . : . : . :
rJMSF030B17+ TGTTGGCTTGCTCGTTANTGGGGTTTAGCTGCTCGGTATGGTATCTGTTCGGATATTGCT
rJMSF007I23+ CGGATATTGCT
rJMFF022M14+ GGTTTAGCTGCTCGGTATGGTATCTGTTCGGATATTGCT
                      ____________________________________________________________
consensus TGTTGGCTTGCTCGTTANTGGGGTTTAGCTGCTCGGTATGGTATCTGTTCGGATATTGCT
 
. : . : . : . : . : . :
rJMSF030B17+ ATCACTAAATATGAATATTGGTCATCTTTAG-CCCNTCTTCCCTTTGAAATAGTCCTCTC
rJMSF007I23+ ATCACTAAATATGAATATTGGTCATCTTTAGNCCCCTCTTCCCTTTGAAATAGTCCTCTC
rJMFF022M14+ ATCACTAAATATGAATATTGGTCATCTTTAG-CCCNTCTTCCCTTTGAAATAGTCCTCTC
                      ____________________________________________________________
consensus ATCACTAAATATGAATATTGGTCATCTTTAG-CCCCTCTTCCCTTTGAAATAGTCCTCTC
 
. : . : . : . : . : . :
rJMSF030B17+ TGCTGGAC-AAAAAGCTAAGGAAGAATGCTGGCAAAAAGGTGATGAAAATCCAGAAA-GG
rJMSF007I23+ TGCTGGACAAAAAAGCTAAGGAAGAATGCTGGCAAAAAGGTGATGAAAATCCAGAAA-GG
rJMFF019E03+ TAAGGAAGAATGCTGGCAAAAAGGTGATGAAAATCCAGAAAGGG
rJMFF022M14+ TGCTGGAC-AAAAAGCTAAGGAAGAATGCTGGCAAAAAGGTGATGAAAATCCAGAAA-GG
                      ____________________________________________________________
consensus TGCTGGAC-AAAAAGCTAAGGAAGAATGCTGGCAAAAAGGTGATGAAAATCCAGAAA-GG
 
. : . : . : . : . : . :
rJMSF030B17+ GTCAAACATGTTCTGGACTTGAGTGATCTGACTGGAGAAGGAAACATTGAGAGTATGCTT
rJMSF007I23+ GTCAAACATGTTCTGGACTTGAGTGATCTGACTGGAGAAGGAAACATTGAGAGTATGCTT
rJMFF019E03+ GTCAAACATGTTCTGGACTTGAGTGATCTGACTGGAGAAGGAAACATTGAGAGTATGCTT
rJMFF022M14+ GTCAAACATGTTCTGGACTTGAGTGATCTGACTGGAGAAGGAAACATTGAGAGTATGCTT
rJMSF010E04+ AGAAGGAAACATNGAGAGTATGCTT
                      ____________________________________________________________
consensus GTCAAACATGTTCTGGACTTGAGTGATCTGACTGGAGAAGGAAACATTGAGAGTATGCTT
 
. : . : . : . : . : . :
rJMSF030B17+ TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
rJMSF007I23+ TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
rJMFF019E03+ TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
rJMFF022M14+ TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
rJMSF010E04+ TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
                      ____________________________________________________________
consensus TCAGTAGAAATGGGCTTGAAAGAGCTTACGTCACTCAAGGTTGAAGACGCAATTGTCCTT
 
. : . : . : . : . : . :
rJMSF030B17+ GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
rJMSF007I23+ GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
rJMFF019E03+ GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
rJMFF022M14+ GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
rJMSF010E04+ GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
                      ____________________________________________________________
consensus GCACTGGCTCAACAACGGCGCCCAAACACTGCTCGAACATCAATCTCAGATCTCAAGTCA
 
. : . : . : . : . : . :
rJMSF030B17+ CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
rJMSF007I23+ CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
rJMFF019E03+ CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGGAGATGTG
rJMSF005C13+ TGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
rJMFF022M14+ CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
rJMSF010E04+ CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
                      ____________________________________________________________
consensus CCTGGTGATCCAAAGTATATGGAAGCAATTGAACTGAGCCCTGAGGAGTCTGAAGATGTG
 
. : . : . : . : . : . :
rJMSF030B17+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
rJMSF007I23+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
rJMFF019E03+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
rJMSF005C13+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
rJMFF022M14+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
rJMSF010E04+ CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
                      ____________________________________________________________
consensus CTTTTCAAGGAGGCATGGCTTACTTACTTTTGGAGAAGAGCCAAGGCCCTAGGTATAGAG
 
. : . : . : . : . : . :
rJMSF030B17+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
rJMSF007I23+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
rJMFF019E03+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
rJMSF005C13+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
rJMFF022M14+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
rJMSF010E04+ GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
                      ____________________________________________________________
consensus GAGGAAATAGCCAACAAACAGCTTCAATTTTGGATCGGCCGCAGTGCAGAATCACCAACC
 
. : . : . : . : . : . :
rJMSF030B17+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
rJMSF007I23+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
rJMFF019E03+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
rJMSF005C13+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
rJMFF022M14+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
JMFF026A05- TTGAACAAGGGCTAATGGAGCTG-GGAAATTGGGCATTGAG
rJMFF026A05+ TTGAACAAGGGCTAATGGAGCTG-GGAAATTGGGCATTGAG
rJMFF009N14+ TTGAACAAGGGCTAATGGAGCTG-GGAAATTGGGCATTGAG
JMFF009N14- TTGAACAAGGGCTAATGGAGCTG-GGAAATTGGGCATTGAG
rJMSF010E04+ TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
                      ____________________________________________________________
consensus TCACATGATGCTGTTGATGTTGAACAAGGGCTAATGGAGCTGAGGAAATTGGGCATTGAG
 
. : . : . : . : . : . :
rJMSF030B17+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMSF007I23+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMFF019E03+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMSF005C13+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMFF022M14+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
JMFF026A05- CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMFF026A05+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMFF009N14+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
JMFF009N14- CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
rJMSF010E04+ CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
                      ____________________________________________________________
consensus CATCGACTATGGGAGGCATCTCGCAAAGAAACCGACCAGGATTCTTCTCTTATTGGAAAG
 
. : . : . : . : . : . :
rJMSF030B17+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMSF007I23+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMFF019E03+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMSF005C13+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMFF022M14+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
JMFF026A05- TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMFF026A05+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMFF009N14+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
JMFF009N14- TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
rJMSF010E04+ TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
                      ____________________________________________________________
consensus TAACTCCATCCACCACACCATCAAAGATTTCATCGACTGCAAGTTAGTGTATGTATTTGT
 
. : . : . : . : . : . :
rJMSF030B17+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
rJMSF007I23+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGT
rJMFF019E03+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
rJMSF005C13+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGT
rJMFF022M14+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
JMFF026A05- TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
rJMFF026A05+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
rJMFF009N14+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
JMFF009N14- TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
rJMSF010E04+ TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
                      ____________________________________________________________
consensus TTGCCTTTCCACTTGATGCGCCATTTTACCTTAATAATGTAAGCTAAATATATGTTGACA
 
. : . : . : . : . : . :
rJMSF030B17+ GATTATC
rJMFF019E03+ GATTATCCTTCACAGTGCAATAGCATAAA
rJMFF022M14+ GATTATCCTTCACAGTGCAATAGCATAAAT
JMFF026A05- GATTATCCTTCACAGTGCAATAGCATAAATATATATATTACTAGATGGTC
rJMFF026A05+ GATTATCCTTCACAGTGCAATAGCATAAATATATAT
rJMFF009N14+ GATTATCCTTCACAGTGCAATAGCATAAATATA
JMFF009N14- GATTATCCTTCACAGTGCAATAGCATAAATATATATATTACTAGATGGTC
rJMSF010E04+ GATTATCCTTCACAGTGCAATAGCATAAATATATATATTACTAGATGGTCTACGTTGCTT
                      ____________________________________________________________
consensus GATTATCCTTCACAGTGCAATAGCATAAATATATATATTACTAGATGGTCTACGTTGCTT
 
. : . : . : . : . : . :
rJMSF010E04+ GGTGTCTATTGTAATCAATAGTATCAATCATAATAATAAATAATCACCTAATATTTTGAA
                      ____________________________________________________________
consensus GGTGTCTATTGTAATCAATAGTATCAATCATAATAATAAATAATCACCTAATATTTTGAA