Contig 009826:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I23Sequence493004555 (9)ref|XP_006343543.1|2e-49PREDICTED: xylose isomerase-like [Solanum tuberosum]704009826 (7)gb|EYU42442.1|1e-106hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMFF024G21Sequence462004555 (9)ref|XP_006343543.1|6e-41PREDICTED: xylose isomerase-like [Solanum tuberosum]825009826 (7)ref|XP_006343543.1|1e-107PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMFF047G23Sequence422004555 (9)ref|XP_006343543.1|8e-33PREDICTED: xylose isomerase-like [Solanum tuberosum]383009826 (7)ref|XP_006343543.1|5e-22PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMSF013D20Sequence440004555 (9)ref|XP_006343543.1|3e-61PREDICTED: xylose isomerase-like [Solanum tuberosum]785009826 (7)ref|XP_006343543.1|3e-111PREDICTED: xylose isomerase-like [Solanum tuberosum]
JMSF015D02Sequence407004555 (9)ref|XP_006343543.1|1e-55PREDICTED: xylose isomerase-like [Solanum tuberosum]736009826 (7)gb|EYU42442.1|2e-128hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMSF034L06Sequence626004555 (9)ref|XP_006343543.1|5e-104PREDICTED: xylose isomerase-like [Solanum tuberosum]721009826 (7)gb|EYU42442.1|3e-128hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU
JMSF044I14Sequence800004555 (9)ref|XP_006343543.1|5e-103PREDICTED: xylose isomerase-like [Solanum tuberosum]752009826 (7)gb|EYU42442.1|5e-134hypothetical protein MIMGU_mgv1a0056111mg, partial [Erythranthe guttata] gb|EYU

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+                                     GCTGAACCATTTGCCAGATTCATGGAAGCTGCT
rJMFF024G21+                                                                    CT
                      ____________________________________________________________
consensus                                        GCTGAACCATTTGCCAGATTCATGGAAGCTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
rJMSF015D02+                                                                  TCAG
rJMSF044I14+                                                 TTCATTGAGCCTAAGCCTCAG
rJMFF024G21+          GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
                      ____________________________________________________________
consensus             GTTGCTTATAAGAAAAAGATTGGATTTAAAGGAACATTGTTCATTGAGCCTAAGCCTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF034L06+            ACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF015D02+          GGACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMSF044I14+          GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
rJMFF024G21+          GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
                      ____________________________________________________________
consensus             GAACCTACCAAGCATCAGTATGACTGGGATGCTGCTACAACTGCTAATTTCTTGCGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF034L06+          AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF015D02+          AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMSF044I14+          AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMFF024G21+          AATGGGCTTATAGATGAGTTCA-----AATATTGAATGCAACCATGCCACTCTGTCTGGT
rJMFF015I23+                                     AATATTGAATGCAACCATGCCACTCTGTCTGGT
                      ____________________________________________________________
consensus             AATGGGCTTATAGATGAGTTCAAATTGAATATTGAATGCAACCATGCCACTCTGTCTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF034L06+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF015D02+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMSF044I14+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMFF024G21+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
rJMFF015I23+          CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
                      ____________________________________________________________
consensus             CACAGTTGCCATCATGAAGTTGAGACAGCAAGGATTAATGGTTTGCTAGGAAATATTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF034L06+          GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF015D02+          GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMSF044I14+          GCAAACAGCGGCGATCCTCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMFF024G21+          GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
rJMFF015I23+          GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
                      ____________________________________________________________
consensus             GCAAACAGCGGCGATCCCCAAACTGGCTGGGATACAGATCAGTTCCCAATGGATGTAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF034L06+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF015D02+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMSF044I14+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMFF024G21+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
rJMFF015I23+          GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
                      ____________________________________________________________
consensus             GAAGCAACTCTCGTTATGCTCTCTGTTATTAAAAATGGTGGGCTCGCACCAGGAGGATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF034L06+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF015D02+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMSF044I14+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMFF024G21+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
rJMFF015I23+          AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
                      ____________________________________________________________
consensus             AACTTTGATGCCAAATTGCGGAGGGAGAGCACAGATGTTGAAGACATCTTTATCGCTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF034L06+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF015D02+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMSF044I14+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF024G21+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF015I23+          ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
rJMFF047G23+                                             AAGCGCTGCAAAGCTGATCGAGGAT
                      ____________________________________________________________
consensus             ATTGGTGGTATGGATACCCTGGCCCGTGGCCTCCGAAGCGCTGCAAAGCTGATCGAGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GGTTCTCTGAAGGAACT--TTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF034L06+          GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF015D02+          GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMSF044I14+          GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF024G21+          GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF015I23+          GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
rJMFF047G23+          GGTTCTCTGAAGGAACTT-TTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
                      ____________________________________________________________
consensus             GGTTCTCTGAAGGAACTTGTTCGCAAGAGGTACCAAAGTTTTGACTCTGAGCTTGGTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF034L06+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF015D02+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMSF044I14+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF024G21+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF015I23+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
rJMFF047G23+          GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
                      ____________________________________________________________
consensus             GCCATTGAGGGTGGAAAGGCTGATTTTGAACTTCTGGAGAAGAAAGCTTTGGAATGGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF034L06+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF015D02+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMSF044I14+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF024G21+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF015I23+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
rJMFF047G23+          GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
                      ____________________________________________________________
consensus             GAACCCAAAGTCCCTTCTGCCAAACAGGAACTCGCTGAGATGATCCTGCAATCTGCACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF034L06+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF015D02+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMSF044I14+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF024G21+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF015I23+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
rJMFF047G23+          TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
                      ____________________________________________________________
consensus             TAGAAGAGAAGAGAAGAGACCCATCGCCATGTTTAGCAATTAGTATTAGTATTAGCTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013D20+          CTATTAGCCATAATGACAGACAAGAC                                  
rJMSF034L06+          CTATTAGCCATAATGACAGACAAGAC                                  
rJMSF015D02+          CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMSF044I14+          CTATTAGCCATAATGACAGACAAGACCAGTGTTTTAGTGTCGCATTC             
rJMFF024G21+          CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMFF015I23+          CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
rJMFF047G23+          CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
                      ____________________________________________________________
consensus             CTATTAGCCATAATGACAGACAAGA-CAGTGTTTTAGTGTCGCATTCGTAAATGGTTAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF015D02+          CAAATACTCTACT                                               
rJMFF024G21+          CAAATACTCTACTTTCTACTCTAATAAATTATACCCC                       
rJMFF015I23+          CAAATACTCTACTTTCTACTCTAATAAATTATACCCC                       
rJMFF047G23+          CAAATACTCTACTTTCTACTCTAATAAATTATACCCCTATATTATATTTTACGCCAAAAT
                      ____________________________________________________________
consensus             CAAATACTCTACTTTCTACTCTAATAAATTATACCCCTATATTATATTTTACGCCAAAAT