Contig 009802:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001G16Sequence608013561 (5)ref|XP_008453712.1|3e-38PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m769009802 (6)ref|XP_009615489.1|3e-94PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo
JMFF001K22Sequence584013561 (5)ref|XP_008453712.1|2e-33PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m545009802 (6)ref|XP_009757147.1|2e-42PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo
JMFF045F11Sequence646013561 (5)ref|XP_008453712.1|5e-40PREDICTED: transmembrane and coiled-coil domain-containing protein 4 [Cucumis m628009802 (6)ref|XP_009615489.1|1e-46PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo
JMFS021B10Sequence629009802 (6)gb|EYU31146.1|5e-47hypothetical protein MIMGU_mgv1a002490mg [Erythranthe guttata]
JMSF046A02Sequence682013561 (5)ref|XP_006343378.1|1e-42PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo832009802 (6)ref|XP_009615490.1|3e-93PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo
JMSF049O20Sequence679013561 (5)ref|XP_010317300.1|155PREDICTED: uncharacterized protein LOC104646015 [Solanum lycopersicum]784009802 (6)ref|XP_009615490.1|1e-96PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isofo

Alignment

This contig is upended


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JMFS021B10- GCCGAATCT
                      ____________________________________________________________
consensus GCCGAATCT
 
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JMFS021B10- TCTAAAAGCAGATGGGCTAAGTGGAGACGTGGAGGTATCATAGGTGCAGCAGCATTGACA
                      ____________________________________________________________
consensus TCTAAAAGCAGATGGGCTAAGTGGAGACGTGGAGGTATCATAGGTGCAGCAGCATTGACA
 
. : . : . : . : . : . :
JMFS021B10- GGAGGAACATTAATGGCGATTACTGGTGGTTTAGCTGCTCCAGCCATTGCTGCAGGGTTT
                      ____________________________________________________________
consensus GGAGGAACATTAATGGCGATTACTGGTGGTTTAGCTGCTCCAGCCATTGCTGCAGGGTTT
 
. : . : . : . : . : . :
JMFS021B10- GGTGCTTTAGCTCCAACATTGGGAACTCTTGTTCCTGTGATTGGAGCAAGTGGGTTCGCT
                      ____________________________________________________________
consensus GGTGCTTTAGCTCCAACATTGGGAACTCTTGTTCCTGTGATTGGAGCAAGTGGGTTCGCT
 
. : . : . : . : . : . :
JMFS021B10- GCGGTTGCCACTGCTGCAGGAAGTGTTGTTGGCTCTGTCGCAGTTGCTGCATCATTTGGA
                      ____________________________________________________________
consensus GCGGTTGCCACTGCTGCAGGAAGTGTTGTTGGCTCTGTCGCAGTTGCTGCATCATTTGGA
 
. : . : . : . : . : . :
JMFS021B10- GCTGCCGGAGCGGGACTTACAGGGTCTAAAGTGGCTCGGAGAATGGGAGATGTTGATGAA
                      ____________________________________________________________
consensus GCTGCCGGAGCGGGACTTACAGGGTCTAAAGTGGCTCGGAGAATGGGAGATGTTGATGAA
 
. : . : . : . : . : . :
JMFS021B10- TTTGAGTTTAAAACAATAGGGCAAAACCATAACAAAGGCCGGCTAGCAGTTGAGATATTA
                      ____________________________________________________________
consensus TTTGAGTTTAAAACAATAGGGCAAAACCATAACAAAGGCCGGCTAGCAGTTGAGATATTA
 
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JMFS021B10- ATCACTGGATTTGTTTTCGAGGAGAGTGATTTTTTTAGACCTTGGGAAGGCGAATACAAT
                      ____________________________________________________________
consensus ATCACTGGATTTGTTTTCGAGGAGAGTGATTTTTTTAGACCTTGGGAAGGCGAATACAAT
 
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JMFS021B10- AACTTGGAAAGATATGCACTGCAGTGGGAGTCTAAGCATCTAATGGCTGTAAGCTATGCA
                      ____________________________________________________________
consensus AACTTGGAAAGATATGCACTGCAGTGGGAGTCTAAGCATCTAATGGCTGTAAGCTATGCA
 
. : . : . : . : . : . :
JMFS021B10- ATTAGGAATTGGCTTACTTCAAGTATTGCTCTTGAATTAATGAAGCGAGGTGCCATGATG
rJMSF046A02+ AGGTGCCATGATG
                      ____________________________________________________________
consensus ATTAGGAATTGGCTTACTTCAAGTATTGCTCTTGAATTAATGAAGCGAGGTGCCATGATG
 
. : . : . : . : . : . :
JMFS021B10- ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTT--GGCCAGCAACATTACTTGCTCTTA
rJMSF046A02+ ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTTNGGCCCAGCAACATTACTTGCTCTTA
rJMSF049O20+ CCAGCAACNNTACTTGCTCTTA
rJMFF001G16+ TA
                      ____________________________________________________________
consensus ACAGTATTGAGCTCTTTCTTAACAGCCTTGGCTTNGGGCCAGCAACATTACTTGCTCTTA
 
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JMFS021B10- CTCATTTTATTGACAGTGAATG
rJMSF046A02+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
rJMSF049O20+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
rJMFF001G16+ CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
                      ____________________________________________________________
consensus CTCATTTTATTGACAGTGAATGGACAATTGCTGTAGACAGATCTGATAAGGCTGGAATAC
 
. : . : . : . : . : . :
rJMSF046A02+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
rJMSF049O20+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
rJMFF001G16+ TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
                      ____________________________________________________________
consensus TGCTGGCAGAGGTTCTGCAGAAAGGATTGCAAGGGCACAGGCCTGTGACACTAGTTGGTT
 
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rJMSF046A02+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
rJMFF001K22+ TGGCAATA
rJMSF049O20+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
rJMFF001G16+ TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
                      ____________________________________________________________
consensus TTTCGCTGGGGGCAAGAGTAATCTTCAAATGTCTTCAGATTTTGGCTGCCAGTGGCAATA
 
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rJMSF046A02+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF001K22+ ATNCCGGACTTNTANAAAGAGTNGTTCTTNTTGGGGCGCCAATTAGGATTAGAGACGTGA
rJMSF049O20+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF001G16+ ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
rJMFF045F11+ GGGGCGCCAATTAGGATNAGAGATGTGA
                      ____________________________________________________________
consensus ATGCCGGACTTGTAGAAAGAGTTGTTCTTCTTGGGGCGCCAATTAGGATTAGAGATGTGA
 
. : . : . : . : . : . :
rJMSF046A02+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF001K22+ ACTNGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAANGTCTATTCTACAAANG
rJMSF049O20+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF001G16+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
rJMFF045F11+ ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
                      ____________________________________________________________
consensus ACTGGGAAGCAGTTAGAAAGGTGGTGGCTGGGAGGTTTATTAATGTCTATTCTACAAATG
 
. : . : . : . : . : . :
rJMSF046A02+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF001K22+ ATTGGATGCTTGGAATTGTCNNTCGTGCTAGTNTCNTGAGTCAAGGGCTAGCTGGGATTC
rJMSF049O20+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF001G16+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
rJMFF045F11+ ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
                      ____________________________________________________________
consensus ATTGGATGCTTGGAATTGTCTTTCGTGCTAGTCTCCTGAGTCAAGGGCTAGCTGGGATTC
 
. : . : . : . : . : . :
rJMSF046A02+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF001K22+ ANCCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGNNCTGATTGATGGCCACT
rJMSF049O20+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF001G16+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
rJMFF045F11+ AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
                      ____________________________________________________________
consensus AACCGGTTGATGTTCCTGGAGTCGAGAATGTTGATGTAACAGAACTGATTGATGGCCACT
 
. : . : . : . : . : . :
rJMSF046A02+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF001K22+ CTGCATNNTTGTGGNNTAGCCAAGAGATTCTAGNACTGCTTCAGCTGGACACATATTATC
rJMSF049O20+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF001G16+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
rJMFF045F11+ CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
                      ____________________________________________________________
consensus CTGCATATTTGTGGACTAGCCAAGAGATTCTAGAACTGCTTCAGCTGGACACATATTATC
 
. : . : . : . : . : . :
rJMSF046A02+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF001K22+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTCGATTNTCAGCT
rJMSF049O20+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF001G16+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
rJMFF045F11+ CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
                      ____________________________________________________________
consensus CTGTTTTTGGTCGCGCTTCGAGATAGGACTTGCGTCATATTTTGCCGTTGATTTTCAGCT
 
. : . : . : . : . : . :
rJMSF046A02+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF001K22+ TACAAGNCAGGGTACAGAATTCNNNACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMSF049O20+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF001G16+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
rJMFF045F11+ TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
                      ____________________________________________________________
consensus TACAAGACAGGGTACAGAATTCAAAACTGAGGAAGGGGGTGTAAACTGTAAAGGGGTTAT
 
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rJMSF046A02+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF001K22+ TCTNGCCGTTGTAAATACNCCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMSF049O20+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF001G16+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
rJMFF045F11+ TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
                      ____________________________________________________________
consensus TCTTGCTGTTGTAAATACACCATATCTCTTCTCTTCAGAACTTTTACAATGGCTTTGAAA
 
. : . : . : . : . : . :
rJMSF046A02+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF001K22+ CNTAGNAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCA
rJMSF049O20+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF001G16+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
rJMFF045F11+ CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
                      ____________________________________________________________
consensus CTTAGAAGATATGTAATTCCAATAGAATTTCATTACTCTGAGAATGAGAGATTTTCATTG
 
. : . : . : . : . : . :
rJMSF046A02+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAA
rJMSF049O20+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAA
rJMFF001G16+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGAT
rJMFF045F11+ ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGATTGATAATTTAATAATGAT
                      ____________________________________________________________
consensus ATGTTTTTTGAAATTGTAATTGCACCATGTAACTTAGAAGATTGATAATTTAATAATGAT
 
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rJMFF045F11+ GAGGGGGAGTTGTTATCCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus GAGGGGGAGTTGTTATCCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGT